RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SOX4Q06945 474 aaPredicted RBP19.55■□□□□ 0.72
MKS1-209ENST00000580127 MRPL58Q14197 206 aaKnown RBP19.55■□□□□ 0.72
MKS1-209ENST00000580127 KYAT1Q16773 422 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 SLC5A9Q2M3M2 681 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 RINT1Q6NUQ1 792 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 IER2Q9BTL4 223 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 PLEKHA5Q9HAU0 1116 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 HEBP1Q9NRV9 189 aa19.55■□□□□ 0.72
MKS1-209ENST00000580127 AFF4Q9UHB7 1163 aaKnown RBP19.55■□□□□ 0.72
MKS1-209ENST00000580127 OTOGLQ3ZCN5 2332 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 SLC16A4O15374 487 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 TBC1D4O60343 1298 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 CEBPBP17676 345 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 PSMC3P17980 439 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 ERICH6BQ5W0A0 696 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 C1orf186Q6ZWK4 172 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 USP37Q86T82 979 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 DCLK2Q8N568 766 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 CEP120Q8N960 986 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 SPIRE2Q8WWL2 714 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 SMARCD2Q92925 531 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 CDK5RAP3Q96JB5 506 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 ZMAT2Q96NC0 199 aaKnown RBP19.54■□□□□ 0.72
MKS1-209ENST00000580127 TBC1D32Q96NH3 1257 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 PLA2G2FQ9BZM2 168 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 TRPV5Q9NQA5 729 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 ASAH2Q9NR71 780 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 RAB23Q9ULC3 237 aa19.54■□□□□ 0.72
MKS1-209ENST00000580127 PRR5-ARHGAP8B1AHC4 643 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 XPOTO43592 962 aaKnown RBP19.53■□□□□ 0.72
MKS1-209ENST00000580127 HARSP12081 509 aaKnown RBP19.53■□□□□ 0.72
MKS1-209ENST00000580127 CPB1P15086 417 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 PROZP22891 400 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 GUCY2CP25092 1073 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 TARSP26639 723 aaKnown RBP19.53■□□□□ 0.72
MKS1-209ENST00000580127 ARHGAP8P85298 464 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 PLD1Q13393 1074 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 NOLC1Q14978 699 aaKnown RBP eCLIP19.53■□□□□ 0.72
MKS1-209ENST00000580127 ZRSR1Q15695 479 aaKnown RBP19.53■□□□□ 0.72
MKS1-209ENST00000580127 FAM78AQ5JUQ0 283 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 PRSS36Q5K4E3 855 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 C1orf228Q6PIY5 440 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 ZPBP2Q6X784 338 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 MAMSTRQ6ZN01 415 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 YAF2Q8IY57 180 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 ZBTB44Q8NCP5 570 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 DEPDC1BQ8WUY9 529 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 DDX12PQ92771 950 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 TSPAN18Q96SJ8 248 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 KCND2Q9NZV8 630 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 PCDHB8Q9UN66 801 aa19.53■□□□□ 0.72
MKS1-209ENST00000580127 SFI1A8K8P3 1242 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 ZNF263O14978 683 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 SEC24AO95486 1093 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 CLTAP09496 248 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 MYL4P12829 197 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 PLS3P13797 630 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 SCP2P22307 547 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 ST3GAL1Q11201 340 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 DAW1Q8N136 415 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 C18orf25Q96B23 403 aaPredicted RBP19.52■□□□□ 0.72
MKS1-209ENST00000580127 ASB16Q96NS5 453 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 RUSC1Q9BVN2 902 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 SLITRK6Q9H5Y7 841 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 LARSQ9P2J5 1176 aaKnown RBP19.52■□□□□ 0.72
MKS1-209ENST00000580127 ANKFY1Q9P2R3 1169 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 PCDHB6Q9Y5E3 794 aa19.52■□□□□ 0.72
MKS1-209ENST00000580127 CACNA1AO00555 2505 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 PAX3P23760 479 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 GDI1P31150 447 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 ALDH1A3P47895 512 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 EPHB3P54753 998 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 MLLT6P55198 1093 aaPredicted RBP19.51■□□□□ 0.71
MKS1-209ENST00000580127 YWHAHQ04917 246 aaPredicted RBP19.51■□□□□ 0.71
MKS1-209ENST00000580127 TWF1Q12792 350 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 GRM2Q14416 872 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 NBR1Q14596 966 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 RSPO4Q2I0M5 234 aaPredicted RBP19.51■□□□□ 0.71
MKS1-209ENST00000580127 SLC10A6Q3KNW5 377 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 RILPL1Q5EBL4 403 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 CSGALNACT1Q8TDX6 532 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 FAM3CQ92520 227 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 TCEAL4Q96EI5 215 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 BICD1Q96G01 975 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 DLL3Q9NYJ7 618 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 GMEB2Q9UKD1 530 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 NDRG2Q9UN36 371 aaKnown RBP19.51■□□□□ 0.71
MKS1-209ENST00000580127 MYH11P35749 1972 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 F5P12259 2224 aa19.51■□□□□ 0.71
MKS1-209ENST00000580127 OAZ2O95190 189 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 FGF19O95750 216 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 TOB1P50616 345 aaPredicted RBP19.5■□□□□ 0.71
MKS1-209ENST00000580127 LMNB2Q03252 620 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 MTAPQ13126 283 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 MCTP1Q6DN14 999 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 TAS1R3Q7RTX0 852 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 MFSD6LQ8IWD5 586 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 NELL1Q92832 810 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 MSANTD3Q96H12 275 aa19.5■□□□□ 0.71
MKS1-209ENST00000580127 ZBTB45Q96K62 511 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms