RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 XPOTO43592 962 aaKnown RBP14.6□□□□□ -0.07
TRAF4-214ENST00000580073 HIP1RO75146 1068 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 EDN1P05305 212 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 ZSCAN22P10073 491 aaPredicted RBP14.6□□□□□ -0.07
TRAF4-214ENST00000580073 SCP2P22307 547 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 PTGDRQ13258 359 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 PLD1Q13393 1074 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 CYP4A22Q5TCH4 519 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 C1orf228Q6PIY5 440 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 DGLUCYQ7Z3D6 616 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 BRAPQ7Z569 592 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 KIAA2013Q8IYS2 634 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 IRF7Q92985 503 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 MSANTD3Q96H12 275 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 RPP25Q9BUL9 199 aaKnown RBP14.6□□□□□ -0.07
TRAF4-214ENST00000580073 CYP4F11Q9HBI6 524 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 ZFP14Q9HCL3 533 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 KCND2Q9NZV8 630 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 INSL5Q9Y5Q6 135 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 CLIC4Q9Y696 253 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 OTOGLQ3ZCN5 2332 aa14.6□□□□□ -0.07
TRAF4-214ENST00000580073 WDR27A2RRH5 827 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 TOM1L1O75674 476 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 ABLIM3O94929 683 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 F13A1P00488 732 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 BRCC3P46736 316 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 OSTNP61366 133 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 ADCY1Q08828 1119 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 PTPAQ15257 358 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 KYAT1Q16773 422 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 CTXN3Q4LDR2 81 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 ALKAL1Q6UXT8 129 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 DTHD1Q6ZMT9 781 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 C3orf58Q8NDZ4 430 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 DEPDC1BQ8WUY9 529 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 E2F7Q96AV8 911 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 CDK5RAP3Q96JB5 506 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 GPR88Q9GZN0 384 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 BRD9Q9H8M2 597 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 PTPRHQ9HD43 1115 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 ZSCAN32Q9NX65 697 aa14.59□□□□□ -0.07
TRAF4-214ENST00000580073 DENND4CQ5VZ89 1909 aa14.58□□□□□ -0.07
TRAF4-214ENST00000580073 COL4A3Q01955 1670 aa14.58□□□□□ -0.07
TRAF4-214ENST00000580073 I3L4J1 428 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 CPB1P15086 417 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 GLULP15104 373 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 PROZP22891 400 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 GUCY2CP25092 1073 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 MARCKSP29966 332 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 MATR3P43243 847 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 NRLP54845 237 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 ATP2C1P98194 919 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 GRIN1Q05586 938 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 SF3A1Q15459 793 aaKnown RBP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 SLC5A9Q2M3M2 681 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 ZPBP2Q6X784 338 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 CEP120Q8N960 986 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 CLDN23Q96B33 292 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 MCRS1Q96EZ8 462 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 SUSD3Q96L08 255 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 ZNF512Q96ME7 567 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 USP28Q96RU2 1077 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 CORO1BQ9BR76 489 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 CXCL16Q9H2A7 254 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 TRPV5Q9NQA5 729 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 ANKFY1Q9P2R3 1169 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 AFF4Q9UHB7 1163 aaKnown RBP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 USP20Q9Y2K6 914 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 EP300Q09472 2414 aaPredicted RBP14.58□□□□□ -0.08
TRAF4-214ENST00000580073 DCHS1Q96JQ0 3298 aa14.58□□□□□ -0.08
TRAF4-214ENST00000580073 ZNF292O60281 2723 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 CEBPBP17676 345 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 ABCD1P33897 745 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 ARPP19P56211 112 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 YWHAHQ04917 246 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 CSTF1Q05048 431 aaKnown RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 SOX4Q06945 474 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 ECM1Q16610 540 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 FOXD4L6Q3SYB3 417 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 PRSS36Q5K4E3 855 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 ST13P5Q8NFI4 369 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 SPIRE2Q8WWL2 714 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 BICD1Q96G01 975 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 TSPAN18Q96SJ8 248 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 TRMT61BQ9BVS5 477 aaKnown RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 TARS2Q9BW92 718 aaKnown RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 PLEKHA5Q9HAU0 1116 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 PRMT8Q9NR22 394 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 LARSQ9P2J5 1176 aaKnown RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 TFIP11Q9UBB9 837 aaKnown RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 FBXL5Q9UKA1 691 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 GMEB2Q9UKD1 530 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 RAB23Q9ULC3 237 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 PCDHB8Q9UN66 801 aa14.57□□□□□ -0.08
TRAF4-214ENST00000580073 CACNA1AO00555 2505 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms