RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 M0QZQ0 153 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 KIAA0391O15091 583 aaKnown RBP16.11■□□□□ 0.17
SS18-212ENST00000579061 EIF3DO15371 548 aaKnown RBP eCLIP16.11■□□□□ 0.17
SS18-212ENST00000579061 ADAM12O43184 909 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 TBC1D4O60343 1298 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 RFPL2O75678 378 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 IL18RAPO95256 599 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 HNRNPA1P09651 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
SS18-212ENST00000579061 SPATA31D3P0C874 917 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 CMA1P23946 247 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 MCM4P33991 863 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 OR1D2P34982 312 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 SPAG1Q07617 926 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 TMEM132DQ14C87 1099 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 VARS2Q5ST30 1063 aaKnown RBP16.11■□□□□ 0.17
SS18-212ENST00000579061 LIN9Q5TKA1 542 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 CRELD2Q6UXH1 353 aaPredicted RBP16.11■□□□□ 0.17
SS18-212ENST00000579061 SPATA31D4Q6ZUB0 917 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 UNC13DQ70J99 1090 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 SMG7Q92540 1137 aaKnown RBP16.11■□□□□ 0.17
SS18-212ENST00000579061 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 LRFN3Q9BTN0 628 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 FGFBP2Q9BYJ0 223 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 PRKD2Q9BZL6 878 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
SS18-212ENST00000579061 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
SS18-212ENST00000579061 C11orf16Q9NQ32 467 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 PCDHB8Q9UN66 801 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 CDY1Q9Y6F8 540 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 SCN1AP35498 2009 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 DOCK6Q96HP0 2047 aa16.11■□□□□ 0.17
SS18-212ENST00000579061 PVALEFA0A1B0GWK0 134 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 PRR33A8MZF0 331 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
SS18-212ENST00000579061 POU2F2P09086 479 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 SLFN14P0C7P3 912 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 EHHADHQ08426 723 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 FAM26FQ5R3K3 315 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 CEP57L1Q8IYX8 460 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 TDRD5Q8NAT2 981 aaKnown RBP16.1■□□□□ 0.17
SS18-212ENST00000579061 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 EDAQ92838 391 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 ACSF2Q96CM8 615 aaPredicted RBP16.1■□□□□ 0.17
SS18-212ENST00000579061 OXCT2Q9BYC2 517 aaPredicted RBP16.1■□□□□ 0.17
SS18-212ENST00000579061 IKZF4Q9H2S9 585 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 UBE4BO95155 1302 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 TECTAO75443 2155 aa16.1■□□□□ 0.17
SS18-212ENST00000579061 ANO9A1A5B4 782 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 ABLIM3O94929 683 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 NFICP08651 508 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 PTPN21Q16825 1174 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 PPM1LQ5SGD2 360 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 ZNF280DQ6N043 979 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 RSPO2Q6UXX9 243 aaPredicted RBP16.09■□□□□ 0.17
SS18-212ENST00000579061 EPM2AIP1Q7L775 607 aaPredicted RBP16.09■□□□□ 0.17
SS18-212ENST00000579061 BRSK2Q8IWQ3 736 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 ZNF461Q8TAF7 563 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 ZNF507Q8TCN5 953 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 PIDD1Q9HB75 910 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 CLUHO75153 1309 aa16.09■□□□□ 0.17
SS18-212ENST00000579061 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 ARHGEF37A1IGU5 675 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 PIRO00625 290 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
SS18-212ENST00000579061 EXTL3O43909 919 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 OAZ2O95190 189 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 MYL1P05976 194 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 C8AP07357 584 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 PFKFB1P16118 471 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 TYMPP19971 482 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 SP100P23497 879 aaPredicted RBP16.08■□□□□ 0.16
SS18-212ENST00000579061 LILRA4P59901 499 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 SNRPFP62306 86 aaKnown RBP16.08■□□□□ 0.16
SS18-212ENST00000579061 ZXDAP98168 799 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 ROR1Q01973 937 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 CTXN3Q4LDR2 81 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 C9orf57Q5W0N0 161 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 TPGS2Q68CL5 300 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 FAM213AQ9BRX8 229 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 FBXL5Q9UKA1 691 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 MAFFQ9ULX9 164 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 HPSEQ9Y251 543 aa16.08■□□□□ 0.16
SS18-212ENST00000579061 A0A1B0GVL5 298 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 A0A1W2PQ27 194 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 A0A1W2PQ64 194 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 A0A1W2PQD8 194 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 WDR27A2RRH5 827 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 XYLBO75191 536 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 ATF2P15336 505 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 AFMP43652 599 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 GUCY2FP51841 1108 aa16.07■□□□□ 0.16
SS18-212ENST00000579061 NUCB2P80303 420 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms