RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NLRP9Q7RTR0 991 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 ZNF720Q7Z2F6 126 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 LCA5Q86VQ0 697 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 TRIML2Q8N7C3 387 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 C4orf32Q8N8J7 132 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 HAS1Q92839 578 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 EXT2Q93063 718 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 MKNK1Q9BUB5 465 aa18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 RPF1Q9H9Y2 349 aaKnown RBP18.87■□□□□ 0.61
ATPAF1-214ENST00000576409 ANXA13P27216 316 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 CTCFP49711 727 aaPredicted RBP18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 MRPS9P82933 396 aaKnown RBP18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 ISLR2Q6UXK2 745 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 CNPY4Q8N129 248 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 TATDN2Q93075 761 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 DNAJC19Q96DA6 116 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 AGAP3Q96P47 875 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 SERPINB12Q96P63 405 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 TMEM121Q9BTD3 319 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 UNC45AQ9H3U1 944 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 PCMTD2Q9NV79 361 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 PCDHB2Q9Y5E7 798 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 DNAJC6O75061 913 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 CHRNA5P30532 468 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 BAATQ14032 418 aaPredicted RBP18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 ARHGEF19Q8IW93 802 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 FAM71DQ8N9W8 422 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 C10orf88Q9H8K7 445 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 BATF3Q9NR55 127 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 CHST7Q9NS84 486 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 NEMP1O14524 444 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 MED7O43513 233 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 CCDC22O60826 627 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 KRT76Q01546 638 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 SLFN12LQ6IEE8 588 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 AFAP1L2Q8N4X5 818 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 PDZD8Q8NEN9 1154 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 DHX35Q9H5Z1 703 aaKnown RBP18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
ATPAF1-214ENST00000576409 KCNN4O15554 427 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 JAK3P52333 1124 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 MAPK6Q16659 721 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 MTBPQ96DY7 904 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 MTMR9Q96QG7 549 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 KDM4CQ9H3R0 1056 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 NYAP2Q9P242 653 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 PSMC3IPQ9P2W1 217 aaPredicted RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 XPO7Q9UIA9 1087 aaKnown RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 PNMA3Q9UL41 463 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 DDTLA6NHG4 134 aaPredicted RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 TTC4O95801 387 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 TYK2P29597 1187 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 SEPT12Q8IYM1 358 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 AGAP11Q8TF27 550 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 SMG5Q9UPR3 1016 aaKnown RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 BTKQ06187 659 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 NCOA4Q13772 614 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 TFDP2Q14188 446 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 MROH9Q5TGP6 573 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 FAM160B1Q5W0V3 765 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 JADE1Q6IE81 842 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 TTC13Q8NBP0 860 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 STK32BQ9NY57 414 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 PABPN1LA6NDY0 278 aaKnown RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 SOX11P35716 441 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 AP2B1P63010 937 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 ELF3P78545 371 aaPredicted RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 GABPAQ06546 454 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 NFX1Q12986 1120 aaKnown RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 PTK7Q13308 1070 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 FAM49AQ9H0Q0 323 aaPredicted RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 NEUROG2Q9H2A3 272 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 DDX4Q9NQI0 724 aaKnown RBP18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 ZHX2Q9Y6X8 837 aa18.85■□□□□ 0.61
ATPAF1-214ENST00000576409 BRD2P25440 801 aaKnown RBP18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 CUL3Q13618 768 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 PRAMEF18Q5VWM3 479 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 SPATA18Q8TC71 538 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 SENP7Q9BQF6 1050 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 CENPKQ9BS16 269 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 CREB3O43889 395 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 UPP2O95045 317 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 GTF2H1P32780 548 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 ROR1Q01973 937 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 NKRFO15226 690 aaKnown RBP eCLIP18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 KRT7P08729 469 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 DLG4P78352 724 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 C1orf131Q8NDD1 294 aaKnown RBP18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 ZSWIM2Q8NEG5 633 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 ALG3Q92685 438 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 ZC3H7BQ9UGR2 993 aaKnown RBP18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 NR2E1Q9Y466 385 aa18.84■□□□□ 0.61
ATPAF1-214ENST00000576409 ZSCAN5DPP0CG00 497 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 CA8P35219 290 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 SLC1A1P43005 524 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 IL1RL1Q01638 556 aa18.83■□□□□ 0.61
ATPAF1-214ENST00000576409 CYTH1Q15438 398 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms