RNA–Protein interactions for RNA: ENST00000576019.5

VPS53-219, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-219ENST00000576019 B9A039 149 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 RNF225M0QZC1 329 aaPredicted RBP6.64□□□□□ -1.35
VPS53-219ENST00000576019 ANP32CO43423 234 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 ORC4O43929 436 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 GJB1P08034 283 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 VDRP11473 427 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 AMPD1P23109 780 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 KRT9P35527 623 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 ARL4CP56559 192 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 PRKG2Q13237 762 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 DAG1Q14118 895 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 PFKFB4Q16877 469 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 ZACNQ401N2 412 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 SGO2Q562F6 1265 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 ZPBP2Q6X784 338 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 KRT77Q7Z794 578 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 TMTC1Q8IUR5 882 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 NLGN4XQ8N0W4 816 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 CNPY4Q8N129 248 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 TTC30BQ8N4P2 665 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 USHBP1Q8N6Y0 703 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 GALNT6Q8NCL4 622 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 IL31RAQ8NI17 732 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 SLC30A5Q8TAD4 765 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 BRI3BPQ8WY22 251 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 ACDQ96AP0 544 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 BTBD6Q96KE9 485 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 GPR62Q9BZJ7 368 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 CNTD2Q9H8S5 307 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 GJB4Q9NTQ9 266 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 TBC1D22BQ9NU19 505 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 TMPRSS11EQ9UL52 423 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 COA3Q9Y2R0 106 aaPredicted RBP6.64□□□□□ -1.35
VPS53-219ENST00000576019 TMX2Q9Y320 296 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 CTDP1Q9Y5B0 961 aaPredicted RBP6.64□□□□□ -1.35
VPS53-219ENST00000576019 CAPN6Q9Y6Q1 641 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 RAB3GAP2Q9H2M9 1393 aa6.64□□□□□ -1.35
VPS53-219ENST00000576019 USP24Q9UPU5 2620 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 A0A1W2PRQ8 180 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 UBA6A0AVT1 1052 aaPredicted RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 MED19A0JLT2 244 aaPredicted RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 WASH4PA8MWX3 477 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 C22orf46C9J442 243 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 ADM5C9JUS6 153 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 FOXN3O00409 490 aaPredicted RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 ACKR2O00590 384 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 FOXP2O15409 715 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 PHGDHO43175 533 aaKnown RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 IRAK2O43187 625 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 SART1O43290 800 aaKnown RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 BUB1BO60566 1050 aaPredicted RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 MAFKO60675 156 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 DGKIO75912 1065 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 IL18RAPO95256 599 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 TBX18O95935 607 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 RGPD2P0DJD1 1756 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 KITP10721 976 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 BRAFP15056 766 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 SLC7A1P30825 629 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 ELF1P32519 619 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 COL15A1P39059 1388 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 ITGA8P53708 1063 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 FKBP1BP68106 108 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 KRT76Q01546 638 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 DSC2Q02487 901 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 MALLQ13021 153 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 SPIDRQ14159 915 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 SPECC1Q5M775 1068 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 KIF24Q5T7B8 1368 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 TTLL5Q6EMB2 1281 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 JMJD6Q6NYC1 403 aaPredicted RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 KLHDC10Q6PID8 442 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 NME9Q86XW9 330 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 Q8N1Y9 231 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 MFSD4AQ8N468 514 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 OR10H5Q8NGA6 315 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 UHMK1Q8TAS1 419 aaKnown RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 CXorf38Q8TB03 319 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 ASB12Q8WXK4 309 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 HDAC10Q969S8 669 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 TUBGCP5Q96RT8 1024 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 YIPF2Q9BWQ6 316 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 UNKQ9C0B0 810 aaKnown RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 MRPL18Q9H0U6 180 aaKnown RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 UBN1Q9NPG3 1134 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 OBP2BQ9NPH6 170 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 RIC8BQ9NVN3 520 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 DACT1Q9NYF0 836 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 STK17AQ9UEE5 414 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 CCDC39Q9UFE4 941 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 RALYQ9UKM9 306 aaKnown RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 ITGB1BP2Q9UKP3 347 aa6.63□□□□□ -1.35
VPS53-219ENST00000576019 ZFHX2Q9C0A1 2572 aaPredicted RBP6.63□□□□□ -1.35
VPS53-219ENST00000576019 FAM205AQ6ZU69 1335 aa6.62□□□□□ -1.35
VPS53-219ENST00000576019 TTC21BQ7Z4L5 1316 aa6.62□□□□□ -1.35
VPS53-219ENST00000576019 A0A1W2PPL8 197 aa6.62□□□□□ -1.35
VPS53-219ENST00000576019 FAM90A27PA6NNH2 459 aa6.62□□□□□ -1.35
VPS53-219ENST00000576019 LGALS16A8MUM7 142 aa6.62□□□□□ -1.35
VPS53-219ENST00000576019 SHISA8B8ZZ34 492 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms