RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SLFN12Q8IYM2 578 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 FBXL16Q8N461 479 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 GAB3Q8WWW8 586 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 RSPRY1Q96DX4 576 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 MSANTD3Q96H12 275 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 UROC1Q96N76 676 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 PPP1R10Q96QC0 940 aaKnown RBP17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 HSD17B14Q9BPX1 270 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 CEP72Q9P209 647 aa17.92■□□□□ 0.46
CTDNEP1-211ENST00000575783 FASNP49327 2511 aaKnown RBP17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 CHADO15335 359 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 EXTL3O43909 919 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 LYPLA2O95372 231 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 HOXA6P31267 233 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 RAP1GAPP47736 663 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 NOVA1P51513 510 aaKnown RBP17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 PON2Q15165 354 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 MAPK6Q16659 721 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 EEF1DP3Q658K8 133 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 KDF1Q8NAX2 398 aaPredicted RBP17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 AGXT2Q9BYV1 514 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 ASAH2Q9NR71 780 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 SNX14Q9Y5W7 946 aa17.91■□□□□ 0.46
CTDNEP1-211ENST00000575783 SDK1Q7Z5N4 2213 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 H7C4K7 107 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 GIPC1O14908 333 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 CDCA2Q69YH5 1023 aaPredicted RBP17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 TCEAL6Q6IPX3 200 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 TCEAL3Q969E4 200 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 E2F7Q96AV8 911 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 NAP1L4Q99733 375 aaKnown RBP17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 GPR88Q9GZN0 384 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 C2orf40Q9H1Z8 148 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 GTSE1Q9NYZ3 720 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 FBXL5Q9UKA1 691 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 PCDHA12Q9UN75 941 aa17.9■□□□□ 0.46
CTDNEP1-211ENST00000575783 ACKR2O00590 384 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 ATP2B1P20020 1258 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 CTHP32929 405 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 MPLP40238 635 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 CTXN3Q4LDR2 81 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 PLA2G2CQ5R387 149 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 TPGS2Q68CL5 300 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 RALGPS2Q86X27 583 aaPredicted RBP17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 LEMD2Q8NC56 503 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 SHKBP1Q8TBC3 707 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 ZFYVE19Q96K21 471 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 LARP6Q9BRS8 491 aaKnown RBP17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 VPS45Q9NRW7 570 aa17.89■□□□□ 0.45
CTDNEP1-211ENST00000575783 VWA8A3KMH1 1905 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 RALGAPA1Q6GYQ0 2036 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 IGF2RP11717 2491 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 SMIM28A0A1B0GU29 152 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 A0A1W2PRU2 124 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 EDN1P05305 212 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 EVCP57679 992 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 SOX4Q06945 474 aaPredicted RBP17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 FCHO2Q0JRZ9 810 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 CCINQ13939 588 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 DCAF4L1Q3SXM0 396 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 FAM177A1Q8N128 213 aaPredicted RBP17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 OXER1Q8TDS5 423 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 KCNB2Q92953 911 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 NUB1Q9Y5A7 615 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 PCDHGA5Q9Y5G8 931 aa17.88■□□□□ 0.45
CTDNEP1-211ENST00000575783 DSPP15924 2871 aaKnown RBP17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 NBEAQ8NFP9 2946 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 C4orf47A7E2U8 309 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 PODXLO00592 558 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 DPYSL4O14531 572 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 SYN3O14994 580 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 TOP3BO95985 862 aaKnown RBP17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 EPHA5P54756 1037 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 ZNF252P-AS1Q0IIN9 211 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 STK3Q13188 491 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 EARS2Q5JPH6 523 aaKnown RBP17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 CPLX2Q6PUV4 134 aaKnown RBP17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 ARID3BQ8IVW6 561 aaPredicted RBP17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 SYNPOQ8N3V7 929 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 MCPH1Q8NEM0 835 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 DEPTORQ8TB45 409 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 BSNDQ8WZ55 320 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 LRRC3BQ96PB8 259 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 EDEM2Q9BV94 578 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 GJB4Q9NTQ9 266 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 AFF4Q9UHB7 1163 aaKnown RBP17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 SLC8A2Q9UPR5 921 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 TICRRQ7Z2Z1 1910 aa17.87■□□□□ 0.45
CTDNEP1-211ENST00000575783 SRRM3A6NNA2 597 aaPredicted RBP17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 XRCC6P12956 609 aaKnown RBP eCLIP17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 CPB1P15086 417 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 PSMA5P28066 241 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 TXKP42681 527 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 OSTNP61366 133 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 IRX6P78412 446 aaPredicted RBP17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 MRPL58Q14197 206 aaKnown RBP17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 STXBP5Q5T5C0 1151 aa17.86■□□□□ 0.45
CTDNEP1-211ENST00000575783 PKN3Q6P5Z2 889 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms