RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 K7ESF4 209 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 ABLIM3O94929 683 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 ATF2P15336 505 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 TWF1Q12792 350 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 TEAD2Q15562 447 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 DCAF4L1Q3SXM0 396 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 CTXN3Q4LDR2 81 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 SLC8B1Q6J4K2 584 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 RUFY3Q7L099 469 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 MFSD6LQ8IWD5 586 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 BSNDQ8WZ55 320 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 TRPV5Q9NQA5 729 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 C2orf42Q9NWW7 574 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
PRPF8-208ENST00000573716 NCANO14594 1321 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 H7C4K7 107 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 ACKR2O00590 384 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 MICAL2O94851 1124 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 EDN1P05305 212 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 PXNP49023 591 aaPredicted RBP13.39□□□□□ -0.27
PRPF8-208ENST00000573716 OSTNP61366 133 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 STPG1Q5TH74 334 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 APBB1IPQ7Z5R6 666 aaPredicted RBP13.39□□□□□ -0.27
PRPF8-208ENST00000573716 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
PRPF8-208ENST00000573716 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 SMOC1Q9H4F8 434 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 RXFP3Q9NSD7 469 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 CEP72Q9P209 647 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 FBXL5Q9UKA1 691 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 CYP46A1Q9Y6A2 500 aa13.39□□□□□ -0.27
PRPF8-208ENST00000573716 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
PRPF8-208ENST00000573716 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 PODXLO00592 558 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 MOSPD3O75425 235 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 CDKL5O76039 1030 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 PROS1P07225 676 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 CCDC192P0DO97 292 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 CPB1P15086 417 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 LIMK1P53667 647 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
PRPF8-208ENST00000573716 SHC2P98077 582 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 SOX4Q06945 474 aaPredicted RBP13.38□□□□□ -0.27
PRPF8-208ENST00000573716 NR5A1Q13285 461 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 PON2Q15165 354 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 DGKKQ5KSL6 1271 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 ATF7IP2Q5U623 682 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 SHKBP1Q8TBC3 707 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 RSPRY1Q96DX4 576 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 ZFYVE19Q96K21 471 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 CCDC113Q9H0I3 377 aa13.38□□□□□ -0.27
PRPF8-208ENST00000573716 C8orf33Q9H7E9 229 aaPredicted RBP13.38□□□□□ -0.27
PRPF8-208ENST00000573716 ARHGEF35A5YM69 484 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 SPECC1L-ADORA2AF8WAN1 911 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 DPYSL4O14531 572 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 NEMFO60524 1076 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
PRPF8-208ENST00000573716 KCNK5O95279 499 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 ZNF806P0C7X5 589 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 MCM4P33991 863 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 KRT2P35908 639 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 TPGS2Q68CL5 300 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 ZNF280DQ6N043 979 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 PSAPL1Q6NUJ1 521 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 TXNDC11Q6PKC3 985 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 CACNA2D4Q7Z3S7 1137 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 KBTBD6Q86V97 674 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 WDR5BQ86VZ2 330 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 E2F7Q96AV8 911 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 MSANTD3Q96H12 275 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
PRPF8-208ENST00000573716 TRPV4Q9HBA0 871 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 TOPORSQ9NS56 1045 aaPredicted RBP13.37□□□□□ -0.27
PRPF8-208ENST00000573716 GTSE1Q9NYZ3 720 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 FRYQ5TBA9 3013 aa13.37□□□□□ -0.27
PRPF8-208ENST00000573716 A0A1W2PRU2 124 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 C1QTNF9BB2RNN3 333 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 ARNTLO00327 626 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 SYN3O14994 580 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 CHADO15335 359 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 EXTL3O43909 919 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 PAPSS2O95340 614 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-208ENST00000573716 C1QTNF9P0C862 333 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRPF8-208ENST00000573716 HOXB3P14651 431 aaPredicted RBP13.36□□□□□ -0.27
PRPF8-208ENST00000573716 CTHP32929 405 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 NAMPTP43490 491 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 FOSBP53539 338 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 PPP2R5AQ15172 486 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 NT5DC1Q5TFE4 455 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 RNF43Q68DV7 783 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 C1orf228Q6PIY5 440 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 RNF19BQ6ZMZ0 732 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 HAUS6Q7Z4H7 955 aa13.36□□□□□ -0.27
PRPF8-208ENST00000573716 CEP120Q8N960 986 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms