RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ADCY1Q08828 1119 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 TWF1Q12792 350 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 SAFBQ15424 915 aaKnown RBP eCLIP13.22□□□□□ -0.29
CAPN3-220ENST00000569827 CTXN3Q4LDR2 81 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 HAUS3Q68CZ6 603 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ZNF852Q6ZMS4 543 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 PDZD4Q76G19 769 aaPredicted RBP13.22□□□□□ -0.29
CAPN3-220ENST00000569827 KCNK18Q7Z418 384 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 C4orf32Q8N8J7 132 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 SNX29Q8TEQ0 813 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 KIFAP3Q92845 792 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 RSPRY1Q96DX4 576 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 C8orf76Q96K31 380 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ASB16Q96NS5 453 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 PGLYRP2Q96PD5 576 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 OSBPL6Q9BZF3 934 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 PTPRHQ9HD43 1115 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 GDE1Q9NZC3 331 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 ANKFY1Q9P2R3 1169 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 LRWD1Q9UFC0 647 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 LAMA1P25391 3075 aa13.22□□□□□ -0.29
CAPN3-220ENST00000569827 TBC1D4O60343 1298 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 CPB1P15086 417 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 ATF2P15336 505 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 SOX9P48436 509 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 SATB1Q01826 763 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 DMWDQ09019 674 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 SPEM2Q0P670 501 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 MAPK7Q13164 816 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 SRSF5Q13243 272 aaKnown RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 TEAD2Q15562 447 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 ZRSR1Q15695 479 aaKnown RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 XKR4Q5GH76 650 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 STXBP5Q5T5C0 1151 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 RNF19BQ6ZMZ0 732 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 PRR23BQ6ZRT6 265 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 TCEAL8Q8IYN2 117 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 TTC8Q8TAM2 541 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 NELL1Q92832 810 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 TBC1D32Q96NH3 1257 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 TCHPQ9BT92 498 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 TRMT61BQ9BVS5 477 aaKnown RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 MRPL4Q9BYD3 311 aaKnown RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 EPC1Q9H2F5 836 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 ZFP14Q9HCL3 533 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 KMT5AQ9NQR1 393 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.21□□□□□ -0.29
CAPN3-220ENST00000569827 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
CAPN3-220ENST00000569827 KIAA1549LQ6ZVL6 1849 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 SEC24BO95487 1268 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 VNN2O95498 520 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 TDGF1P13385 188 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 TGM1P22735 817 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 RPS9P46781 194 aaKnown RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 DMP1Q13316 513 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 GAS6Q14393 721 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 IL17AQ16552 155 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 ZSCAN18Q8TBC5 510 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 DDX12PQ92771 950 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 DNASE1L2Q92874 299 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 PLIN2Q99541 437 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 CRISPLD1Q9H336 500 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 LMAN1LQ9HAT1 526 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 AVENQ9NQS1 362 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 C2orf42Q9NWW7 574 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 ARHGAP28Q9P2N2 729 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 CDV3Q9UKY7 258 aaKnown RBP13.2□□□□□ -0.3
CAPN3-220ENST00000569827 PCDHB6Q9Y5E3 794 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 CFAP47Q6ZTR5 3102 aa13.2□□□□□ -0.3
CAPN3-220ENST00000569827 USP24Q9UPU5 2620 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 SLC38A8A6NNN8 435 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 SYN3O14994 580 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 NCAM2O15394 837 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 SOAT2O75908 522 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 CXCL8P10145 99 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 PROZP22891 400 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 CCNE1P24864 410 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 MAGEA9P43362 315 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 TOB1P50616 345 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-220ENST00000569827 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
CAPN3-220ENST00000569827 PTGDRQ13258 359 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 MRPL58Q14197 206 aaKnown RBP13.19□□□□□ -0.3
CAPN3-220ENST00000569827 SLC10A6Q3KNW5 377 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 HEATR6Q6AI08 1181 aaKnown RBP13.19□□□□□ -0.3
CAPN3-220ENST00000569827 ZNF280DQ6N043 979 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
CAPN3-220ENST00000569827 Q6ZS52 159 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms