RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 ASPAP45381 313 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 KYAT1Q16773 422 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 SGSM1Q2NKQ1 1148 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 C10orf76Q5T2E6 689 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 TRIM6Q9C030 488 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 NIF3L1Q9GZT8 377 aa11.73□□□□□ -0.53
PDXDC1-216ENST00000569715 H2AFZP0C0S5 128 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 WEE2P0C1S8 567 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 RAP1GAPP47736 663 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 AMPD2Q01433 879 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 MGAT3Q09327 533 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 NAA30Q147X3 362 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 H2AFVQ71UI9 128 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 ARHGEF26Q96DR7 871 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 HMX1Q9NP08 348 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 KLK14Q9P0G3 267 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 CFHP08603 1231 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 TBXAS1P24557 533 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 AXLP30530 894 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 POLR2BP30876 1174 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 THPOP40225 353 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 NAP1L1P55209 391 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 CDR2Q01850 454 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 GOLPH3Q9H4A6 298 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 M0QZ92 97 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 TACC1O75410 805 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 TERF1P54274 439 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 POU5F1Q01860 360 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 SMG8Q8ND04 991 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 NOX5Q96PH1 765 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 THAP2Q9H0W7 228 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 AGO3Q9H9G7 860 aaKnown RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 TUBGCP4Q9UGJ1 667 aa11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-216ENST00000569715 PPEF2O14830 753 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 NCK2O43639 380 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 TXLNBQ8N3L3 684 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 TRIM58Q8NG06 486 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 DPP3Q9NY33 737 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 CHORDC1Q9UHD1 332 aaPredicted RBP11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 ST3GAL5Q9UNP4 418 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 CNTN6Q9UQ52 1028 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 C2CD2Q9Y426 696 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 IPPQ9Y573 584 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 SRGAP2O75044 1071 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 PALMO75781 387 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 NFX1Q12986 1120 aaKnown RBP11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 WDR72Q3MJ13 1102 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 TWF2Q6IBS0 349 aaKnown RBP11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 RSPH3Q86UC2 560 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 CARD6Q9BX69 1037 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 SDCBP2Q9H190 292 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 SMYD3Q9H7B4 428 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 CISHQ9NSE2 258 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 AGAP1Q9UPQ3 857 aa11.71□□□□□ -0.53
PDXDC1-216ENST00000569715 A0A1W2PQ45 241 aaPredicted RBP11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 A0A1W2PQY0 241 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 MEIS3P2A8K0S8 358 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 RPS6KA5O75582 802 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 FTLP02792 175 aaPredicted RBP11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 ZNF132P52740 706 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 PTPROQ16827 1216 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 ALKAL1Q6UXT8 129 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 OSGEPQ9NPF4 335 aa11.71□□□□□ -0.54
PDXDC1-216ENST00000569715 BTNL10A8MVZ5 291 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 SLU7O95391 586 aaKnown RBP11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 CDH8P55286 799 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 APBB1IPQ7Z5R6 666 aaPredicted RBP11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 TRPV6Q9H1D0 765 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 ISCUQ9H1K1 167 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 NCANO14594 1321 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 FTCDO95954 541 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 YARSP54577 528 aaKnown RBP11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 RPAINQ86UA6 219 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 ALS2CR12Q96Q35 445 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.544e-6■□□□□ 9.4
PDXDC1-216ENST00000569715 CNTN3Q9P232 1028 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 HMGXB4Q9UGU5 601 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 INTUQ9ULD6 942 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 PCDHGC5Q9Y5F6 944 aa11.7□□□□□ -0.54
PDXDC1-216ENST00000569715 CTIFO43310 598 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms