RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ZMYND10O75800 440 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 IL18RAPO95256 599 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 GCNT3O95395 438 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 HARSP12081 509 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 ALADP13716 330 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 PFKFB1P16118 471 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 TKTP29401 623 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 BRCC3P46736 316 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 ACOT2P49753 483 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 PSMD2Q13200 908 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 CUL4BQ13620 913 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 FOXD4L6Q3SYB3 417 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 JADE1Q6IE81 842 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 KANK3Q6NY19 840 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 PRSS55Q6UWB4 352 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 FOXD4L3Q6VB84 417 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 BRSK2Q8IWQ3 736 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 C12orf56Q8IXR9 622 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 ZDHHC14Q8IZN3 488 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 C12orf76Q8N812 135 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 TMEM87AQ8NBN3 555 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 GLIS3Q8NEA6 775 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 BEST2Q8NFU1 509 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 ZNF461Q8TAF7 563 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 HASPINQ8TF76 798 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 SCFD1Q8WVM8 642 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 POMGNT1Q8WZA1 660 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 KIF12Q96FN5 646 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 CHAMP1Q96JM3 812 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 C1QTNF1Q9BXJ1 281 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 POMKQ9H5K3 350 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 WDR6Q9NNW5 1121 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 TBC1D7Q9P0N9 293 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 CGNQ9P2M7 1197 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 TUBGCP4Q9UGJ1 667 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 SERTAD1Q9UHV2 236 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 PCDHB8Q9UN66 801 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 PTPRDP23468 1912 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 ZNF318Q5VUA4 2279 aa8.89□□□□□ -0.99
HDGFL3-205ENST00000568129 CCDC195A0A1B0GUA6 201 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 A0A1B0GVL5 298 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 ARHGEF37A1IGU5 675 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 H7C4K7 107 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 EXTL3O43909 919 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 PRPF6O94906 941 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 CYP11A1P05108 521 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 NFICP08651 508 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 HNRNPA1P09651 372 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 RPL17P18621 184 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 TYMPP19971 482 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 OR1D2P34982 312 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 MATR3P43243 847 aaKnown RBP eCLIP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 LILRA4P59901 499 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 ASIC1P78348 528 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 FAM26FQ5R3K3 315 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 RARS2Q5T160 578 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 C9orf57Q5W0N0 161 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 ELMSAN1Q6PJG2 1045 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 STXBP4Q6ZWJ1 553 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 PALB2Q86YC2 1186 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 EFCAB13Q8IY85 973 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 PLCD3Q8N3E9 789 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 KREMEN2Q8NCW0 462 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 ZSWIM2Q8NEG5 633 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 APPL2Q8NEU8 664 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 HPS3Q969F9 1004 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 CBWD1Q9BRT8 395 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 KIAA1586Q9HCI6 787 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 AVENQ9NQS1 362 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 CDH22Q9UJ99 828 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 NR2E1Q9Y466 385 aa8.88□□□□□ -0.99
HDGFL3-205ENST00000568129 DCXO43602 365 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 RFPL2O75678 378 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 ATF2P15336 505 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 CASP1P29466 404 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 SYKP43405 635 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 AFMP43652 599 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 NDUFA8P51970 172 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 WNT7BP56706 349 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 SPAG1Q07617 926 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 DPYDQ12882 1025 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 TMEM132DQ14C87 1099 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 TPGS2Q68CL5 300 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 TMC5Q6UXY8 1006 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 LIMS2Q7Z4I7 341 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 BMP8AQ7Z5Y6 402 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 CEP57Q86XR8 500 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 ELOA2Q8IYF1 753 aaPredicted RBP8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 TCEAL8Q8IYN2 117 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 CEP57L1Q8IYX8 460 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 GPD1LQ8N335 351 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 TMEM130Q8N3G9 435 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 ENGASEQ8NFI3 743 aa8.87□□□□□ -0.99
HDGFL3-205ENST00000568129 EDAQ92838 391 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms