RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CEP57L1Q8IYX8 460 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 TXNDC5Q8NBS9 432 aaKnown RBP6□□□□□ -1.45
CAPN3-217ENST00000567817 AGBL3Q8NEM8 1001 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 LPIN2Q92539 896 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 MRPS27Q92552 414 aaKnown RBP6□□□□□ -1.45
CAPN3-217ENST00000567817 EDC3Q96F86 508 aaKnown RBP6□□□□□ -1.45
CAPN3-217ENST00000567817 TIGD1Q96MW7 591 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 EYA3Q99504 573 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 BPIFA3Q9BQP9 254 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 CELF4Q9BZC1 486 aaKnown RBP6□□□□□ -1.45
CAPN3-217ENST00000567817 L2HGDHQ9H9P8 463 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 RBPJLQ9UBG7 517 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 CROTQ9UKG9 612 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 ATP23Q9Y6H3 246 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 COL6A3P12111 3177 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 RTL9Q8NET4 1388 aa6□□□□□ -1.45
CAPN3-217ENST00000567817 COL1A1P02452 1464 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 UQCRHLA0A096LP55 91 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 CCDC196A0A1B0GTZ2 297 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 YDJCA8MPS7 323 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 BECN2A8MW95 431 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 KIF2AO00139 706 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ACOT7O00154 380 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 MAN2B1O00754 1011 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 GPAA1O43292 621 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 JAK2O60674 1132 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 PDE8BO95263 885 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 RASGRP1O95267 797 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 NPTXRO95502 500 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 CHGBP05060 677 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 CKMP06732 381 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 UQCRHP07919 91 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ENO2P09104 434 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 PCP11498 1178 aaKnown RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SLC5A1P13866 664 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SYN1P17600 705 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 PTPN1P18031 435 aaKnown RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ADD2P35612 726 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 DNM2P50570 870 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 MLLT6P55198 1093 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 PRMT2P55345 433 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 GSDMDP57764 484 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ZNF280AP59817 542 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 LACTBP83111 547 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 MAP3K12Q12852 859 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ALX1Q15699 326 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SLC4A8Q2Y0W8 1093 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 LRRC24Q50LG9 513 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SLC10A5Q5PT55 438 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 BTBD8Q5XKL5 378 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 MCTP2Q6DN12 878 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 LDHAL6AQ6ZMR3 332 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SYNE3Q6ZMZ3 975 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 CCDC129Q6ZRS4 1044 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 EP400NLQ6ZTU2 488 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ARMC9Q7Z3E5 817 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 FAM124AQ86V42 546 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 OSTM1Q86WC4 334 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 MB21D2Q8IYB1 491 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ELOA2Q8IYF1 753 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 TMTC2Q8N394 836 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 MYRIPQ8NFW9 859 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 FBXO18Q8NFZ0 1043 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 KIAA1524Q8TCG1 905 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SH3TC2Q8TF17 1288 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 ZCCHC14Q8WYQ9 949 aaKnown RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 CCDC34Q96HJ3 373 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SCLYQ96I15 445 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 C8orf76Q96K31 380 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 TCEANC2Q96MN5 208 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 SEC62Q99442 399 aaKnown RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 NACAP1Q9BZK3 213 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 RNF41Q9H4P4 317 aaPredicted RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 TRIM39Q9HCM9 518 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 CNNM1Q9NRU3 951 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 HOOK1Q9UJC3 728 aaKnown RBP5.99□□□□□ -1.45
CAPN3-217ENST00000567817 RIPOR2Q9Y4F9 1068 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 STK36Q9NRP7 1315 aa5.99□□□□□ -1.45
CAPN3-217ENST00000567817 LAMB1P07942 1786 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 NID2Q14112 1375 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 TCRBV16S1A1N1A0A5B0 115 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 MROH6A6NGR9 719 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 ZNF839A8K0R7 811 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 GOLGA8BA8MQT2 603 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 M0R2C6 588 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 CCP110O43303 1012 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PRC1O43663 620 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 FOXD2O60548 495 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 CLASP2O75122 1294 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PPP6R2O75170 966 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 CTDNEP1O95476 244 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 NTSR2O95665 410 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 FGAP02671 866 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 VIL1P09327 827 aaKnown RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 KRT15P19012 456 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 LIFRP42702 1097 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 ME1P48163 572 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 PIP4K2AP48426 406 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-217ENST00000567817 JAM2P57087 298 aa5.98□□□□□ -1.45
CAPN3-217ENST00000567817 SP3Q02447 781 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms