RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 ARHGAP8P85298 464 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 DMWDQ09019 674 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 TWF1Q12792 350 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 NBR1Q14596 966 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 CTXN3Q4LDR2 81 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 PRR23BQ6ZRT6 265 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 GPIHBP1Q8IV16 184 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 MAP4K3Q8IVH8 894 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 FAM3CQ92520 227 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 BORCS6Q96GS4 357 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 PTPRHQ9HD43 1115 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 NUB1Q9Y5A7 615 aa16.97■□□□□ 0.31
PALB2-205ENST00000567003 PHLPP2Q6ZVD8 1323 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 MAN2B1O00754 1011 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 ZNF197O14709 1029 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 SYN3O14994 580 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 HOXC13P31276 330 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 NPTX2P47972 431 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 SRSF5Q13243 272 aaKnown RBP16.96■□□□□ 0.31
PALB2-205ENST00000567003 MRPL58Q14197 206 aaKnown RBP16.96■□□□□ 0.31
PALB2-205ENST00000567003 GAS6Q14393 721 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 TEAD2Q15562 447 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 SEZ6Q53EL9 994 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 CYP4A22Q5TCH4 519 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 APBB1IPQ7Z5R6 666 aaPredicted RBP16.96■□□□□ 0.31
PALB2-205ENST00000567003 DAW1Q8N136 415 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 SMARCD2Q92925 531 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 RSPRY1Q96DX4 576 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 ZBTB45Q96K62 511 aaPredicted RBP16.96■□□□□ 0.31
PALB2-205ENST00000567003 FAM126AQ9BYI3 521 aaPredicted RBP16.96■□□□□ 0.31
PALB2-205ENST00000567003 TOPORSQ9NS56 1045 aaPredicted RBP16.96■□□□□ 0.31
PALB2-205ENST00000567003 KIAA1024Q9UPX6 916 aa16.96■□□□□ 0.31
PALB2-205ENST00000567003 H7C4K7 107 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 ABLIM1O14639 778 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 PSMC3P17980 439 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 SDHBP21912 280 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 CCNE1P24864 410 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 MCM4P33991 863 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 SOX9P48436 509 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 WDR44Q5JSH3 913 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 RNF19BQ6ZMZ0 732 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 SHKBP1Q8TBC3 707 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 ZSCAN18Q8TBC5 510 aaPredicted RBP16.95■□□□□ 0.3
PALB2-205ENST00000567003 IRF7Q92985 503 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 ACAP3Q96P50 834 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 RTKNQ9BST9 563 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 MRPL4Q9BYD3 311 aaKnown RBP16.95■□□□□ 0.3
PALB2-205ENST00000567003 RBM12Q9NTZ6 932 aaKnown RBP16.95■□□□□ 0.3
PALB2-205ENST00000567003 DDX19AQ9NUU7 478 aaKnown RBP16.95■□□□□ 0.3
PALB2-205ENST00000567003 SLC38A7Q9NVC3 462 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 TUBGCP4Q9UGJ1 667 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 RAB23Q9ULC3 237 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 RALGAPA1Q6GYQ0 2036 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 USP24Q9UPU5 2620 aa16.95■□□□□ 0.3
PALB2-205ENST00000567003 CFAP47Q6ZTR5 3102 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 HEPACAM2A8MVW5 462 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 CHURC1-FNTBB4DL54 471 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 E9PMD0 336 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ZNF263O14978 683 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 HIP1RO75146 1068 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 VNN2O95498 520 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 OR4Q2P0C623 313 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 CPB1P15086 417 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 KCNE1P15382 129 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 FNTBP49356 437 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ANAPC15P60006 121 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 SAFBQ15424 915 aaKnown RBP eCLIP16.94■□□□□ 0.3
PALB2-205ENST00000567003 TTC38Q5R3I4 469 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 TPGS2Q68CL5 300 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 LAIR1Q6GTX8 287 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 IQCEQ6IPM2 695 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ZNF280DQ6N043 979 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ELMOD1Q8N336 334 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 TTC8Q8TAM2 541 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 DDX12PQ92771 950 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 SUSD3Q96L08 255 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ZNF512Q96ME7 567 aaPredicted RBP16.94■□□□□ 0.3
PALB2-205ENST00000567003 TBC1D32Q96NH3 1257 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 PGLYRP2Q96PD5 576 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 RUSC1Q9BVN2 902 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 CRISPLD1Q9H336 500 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 SLITRK6Q9H5Y7 841 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ASAH2Q9NR71 780 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 C2orf42Q9NWW7 574 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 CNTN3Q9P232 1028 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 ARHGAP28Q9P2N2 729 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 AFF4Q9UHB7 1163 aaKnown RBP16.94■□□□□ 0.3
PALB2-205ENST00000567003 YIPF1Q9Y548 306 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
PALB2-205ENST00000567003 CNOT1A5YKK6 2376 aaKnown RBP16.94■□□□□ 0.3
PALB2-205ENST00000567003 PP2D1A8MPX8 630 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 ARNTLO00327 626 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 MICAL2O94851 1124 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 MCF2P10911 925 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 CHRNB1P11230 501 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 PROZP22891 400 aa16.93■□□□□ 0.3
PALB2-205ENST00000567003 CCR3P51677 355 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms