RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OAS1P00973 400 aaKnown RBP15.13■□□□□ 0.01
CDH1-209ENST00000566510 ATF7P17544 494 aaPredicted RBP15.13■□□□□ 0.01
CDH1-209ENST00000566510 GTF2H1P32780 548 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 LIG4P49917 911 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 COPS2P61201 443 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 ACCSLQ4AC99 568 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
CDH1-209ENST00000566510 LIN9Q5TKA1 542 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 TMEM270Q6UE05 265 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 ENOSF1Q7L5Y1 443 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 RHOT1Q8IXI2 618 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 FITM2Q8N6M3 262 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.13■□□□□ 0.01
CDH1-209ENST00000566510 MAGEC3Q8TD91 643 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 TRIM11Q96F44 468 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 RBM15Q96T37 977 aaKnown RBP eCLIP15.13■□□□□ 0.01
CDH1-209ENST00000566510 KLHL14Q9P2G3 628 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 SEPT9Q9UHD8 586 aaPredicted RBP15.13■□□□□ 0.01
CDH1-209ENST00000566510 TRIM33Q9UPN9 1127 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 PCDHA10Q9Y5I2 948 aa15.13■□□□□ 0.01
CDH1-209ENST00000566510 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.13■□□□□ 0.01
CDH1-209ENST00000566510 MYBL1P10243 752 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 SWSAP1Q6NVH7 229 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 PRCCQ92733 491 aaPredicted RBP15.12■□□□□ 0.01
CDH1-209ENST00000566510 STAMBPL1Q96FJ0 436 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 PDCD2LQ9BRP1 358 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 MOV10L1Q9BXT6 1211 aaKnown RBP15.12■□□□□ 0.01
CDH1-209ENST00000566510 ADAM33Q9BZ11 813 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 DEFB129Q9H1M3 183 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 AVENQ9NQS1 362 aaPredicted RBP15.12■□□□□ 0.01
CDH1-209ENST00000566510 PCDHB4Q9Y5E5 795 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 ZNF646O15015 1829 aaPredicted RBP15.12■□□□□ 0.01
CDH1-209ENST00000566510 POC1B-GALNT4F8VUJ3 575 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 HLA-DRAP01903 254 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 KRT10P13645 584 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 ALDH5A1P51649 535 aaPredicted RBP15.12■□□□□ 0.01
CDH1-209ENST00000566510 CENPCQ03188 943 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 ATP13A4Q4VNC1 1196 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 RMDN2Q96LZ7 410 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 FBXL18Q96ME1 805 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 PITPNM3Q9BZ71 974 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 PXMP2Q9NR77 195 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 ZNF148Q9UQR1 794 aa15.12■□□□□ 0.01
CDH1-209ENST00000566510 EXOC1LA0A1B0GW35 172 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
CDH1-209ENST00000566510 POTEJP0CG39 1038 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 DSG3P32926 999 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 MAGEA4P43358 317 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 BPIFB4P59827 614 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 MYO1EQ12965 1108 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 GBP7Q8N8V2 638 aaPredicted RBP15.11■□□□□ 0.01
CDH1-209ENST00000566510 SUPT20HQ8NEM7 779 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 IFT74Q96LB3 600 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 SAYSD1Q9NPB0 183 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 TELO2Q9Y4R8 837 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 A8MUI8 341 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 ZNF862O60290 1169 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 ZSCAN5DPP0CG00 497 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 FDX1P10109 184 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 GNA15P30679 374 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 STRN3Q13033 797 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 CCNG2Q16589 344 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 ANKS1BQ7Z6G8 1248 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 C7orf43Q8WVR3 580 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 SLC38A10Q9HBR0 1119 aa15.11■□□□□ 0.01
CDH1-209ENST00000566510 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
CDH1-209ENST00000566510 KRT16P08779 473 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 KLF1Q13351 362 aaPredicted RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 MAMLD1Q13495 774 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 MON1BQ7L1V2 547 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 BBOF1Q8ND07 529 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 AGAP11Q8TF27 550 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 HAUS1Q96CS2 278 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 MAGEB18Q96M61 343 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 TACO1Q9BSH4 297 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 RXFP1Q9HBX9 757 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 MRPL47Q9HD33 250 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 WDR46O15213 610 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 TBC1D12O60347 775 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 KRT15P19012 456 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 CETN2P41208 172 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 WNT7BP56706 349 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 NLRP11P59045 1033 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 IL9RQ01113 521 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 PLCB3Q01970 1234 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 BNIP1Q12981 228 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 BAATQ14032 418 aaPredicted RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 STAT4Q14765 748 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 MTERF2Q49AM1 385 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 TDRD10Q5VZ19 366 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 ZNF677Q86XU0 584 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 KIRREL3Q8IZU9 778 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 NTPCRQ9BSD7 190 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 POLR3FQ9H1D9 316 aaPredicted RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 ANKFY1Q9P2R3 1169 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms