RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 HNRNPDLO14979 420 aaKnown RBP20.4■□□□□ 0.86
CLN3-218ENST00000565688 FAM13AO94988 1023 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 CYP3A5P20815 502 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 LONP1P36776 959 aaKnown RBP20.4■□□□□ 0.86
CLN3-218ENST00000565688 LIG4P49917 911 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 CACNB1Q02641 598 aaPredicted RBP20.4■□□□□ 0.86
CLN3-218ENST00000565688 PRKCQQ04759 706 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 PPP2R3AQ06190 1150 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 ING5Q8WYH8 240 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 DDX12PQ92771 950 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 KXD1Q9BQD3 176 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 PARVGQ9HBI0 331 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 TBX20Q9UMR3 447 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 UBQLN1Q9UMX0 589 aaKnown RBP20.4■□□□□ 0.86
CLN3-218ENST00000565688 INSL5Q9Y5Q6 135 aa20.4■□□□□ 0.86
CLN3-218ENST00000565688 MYH15Q9Y2K3 1946 aa20.39■□□□□ 0.86
CLN3-218ENST00000565688 ZNF197O14709 1029 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 XPOTO43592 962 aaKnown RBP20.39■□□□□ 0.85
CLN3-218ENST00000565688 ECI2O75521 394 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 MICAL2O94851 1124 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 PIGRP01833 764 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 DCNP07585 359 aaKnown RBP20.39■□□□□ 0.85
CLN3-218ENST00000565688 LRPAP1P30533 357 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 ZNF131P52739 623 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 SNW1Q13573 536 aaKnown RBP20.39■□□□□ 0.85
CLN3-218ENST00000565688 MLF2Q15773 248 aaPredicted RBP20.39■□□□□ 0.85
CLN3-218ENST00000565688 SLC5A9Q2M3M2 681 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 SPECC1Q5M775 1068 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 ELMOD1Q8N336 334 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 MYCT1Q8N699 235 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 RASSF8Q8NHQ8 419 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 KIF12Q96FN5 646 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 CORO1BQ9BR76 489 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 HAPLN2Q9GZV7 340 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 SEMA4AQ9H3S1 761 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 DLGAP2Q9P1A6 1054 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 AFF4Q9UHB7 1163 aaKnown RBP20.39■□□□□ 0.85
CLN3-218ENST00000565688 FAM186AA6NE01 2351 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 NOTCH4Q99466 2003 aa20.39■□□□□ 0.85
CLN3-218ENST00000565688 ZNF292O60281 2723 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 KANSL1LA0AUZ9 987 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 K7ENM7 598 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 M0QZQ0 153 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 OGTO15294 1046 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 KRT18P05783 430 aaKnown RBP20.38■□□□□ 0.85
CLN3-218ENST00000565688 DHX8Q14562 1220 aaKnown RBP20.38■□□□□ 0.85
CLN3-218ENST00000565688 ZBTB6Q15916 424 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 SLC44A4Q53GD3 710 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 IQCEQ6IPM2 695 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 MCRS1Q96EZ8 462 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 DDX23Q9BUQ8 820 aaKnown RBP20.38■□□□□ 0.85
CLN3-218ENST00000565688 FOXQ1Q9C009 403 aa20.38■□□□□ 0.85
CLN3-218ENST00000565688 PDCD11Q14690 1871 aaKnown RBP20.38■□□□□ 0.85
CLN3-218ENST00000565688 SPTBN4Q9H254 2564 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 TRAK2O60296 914 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 OAZ2O95190 189 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 SEC24AO95486 1093 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 CPB1P15086 417 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 CEBPBP17676 345 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 PLCG1P19174 1290 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 YWHAHQ04917 246 aaPredicted RBP20.37■□□□□ 0.85
CLN3-218ENST00000565688 ADCY1Q08828 1119 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 PRSS36Q5K4E3 855 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 CYP4A22Q5TCH4 519 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 C1orf210Q8IVY1 113 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 CD302Q8IX05 232 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 LEMD2Q8NC56 503 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 RAD54LQ92698 747 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 ELSPBP1Q96BH3 223 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 ZNF512Q96ME7 567 aaPredicted RBP20.37■□□□□ 0.85
CLN3-218ENST00000565688 OSBPL6Q9BZF3 934 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 RPF1Q9H9Y2 349 aaKnown RBP20.37■□□□□ 0.85
CLN3-218ENST00000565688 BLOC1S4Q9NUP1 217 aa20.37■□□□□ 0.85
CLN3-218ENST00000565688 A0A0B4J269 797 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 LACTBL1A8MY62 500 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 FAM189A1O60320 539 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 TBCAO75347 108 aaKnown RBP20.36■□□□□ 0.85
CLN3-218ENST00000565688 ADRB2P07550 413 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 PAX3P23760 479 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 TNFSF9P41273 254 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 AARSP49588 968 aaKnown RBP eCLIP20.36■□□□□ 0.85
CLN3-218ENST00000565688 SPAG1Q07617 926 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 MCM6Q14566 821 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 KARSQ15046 597 aaKnown RBP20.36■□□□□ 0.85
CLN3-218ENST00000565688 SF3A1Q15459 793 aaKnown RBP20.36■□□□□ 0.85
CLN3-218ENST00000565688 ENOX2Q16206 610 aaKnown RBP20.36■□□□□ 0.85
CLN3-218ENST00000565688 ZC3H14Q6PJT7 736 aaKnown RBP20.36■□□□□ 0.85
CLN3-218ENST00000565688 PDZD4Q76G19 769 aaPredicted RBP20.36■□□□□ 0.85
CLN3-218ENST00000565688 USP37Q86T82 979 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 MSTO1Q9BUK6 570 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 BCO2Q9BYV7 579 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 GVINP1Q7Z2Y8 2422 aa20.36■□□□□ 0.85
CLN3-218ENST00000565688 PDCP20941 246 aa20.35■□□□□ 0.85
CLN3-218ENST00000565688 TWF1Q12792 350 aa20.35■□□□□ 0.85
CLN3-218ENST00000565688 ADSSL1Q8N142 457 aa20.35■□□□□ 0.85
CLN3-218ENST00000565688 LRRC15Q8TF66 581 aa20.35■□□□□ 0.85
CLN3-218ENST00000565688 LARP4BQ92615 738 aaKnown RBP20.35■□□□□ 0.85
CLN3-218ENST00000565688 NELL2Q99435 816 aa20.35■□□□□ 0.85
CLN3-218ENST00000565688 CCSER1Q9C0I3 900 aa20.35■□□□□ 0.85
CLN3-218ENST00000565688 ZHX3Q9H4I2 956 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms