RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 ICE2Q659A1 982 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 SND1Q7KZF4 910 aaKnown RBP eCLIP10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 RIN2Q8WYP3 895 aaPredicted RBP10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 RUFY1Q96T51 708 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 CGRRF1Q99675 332 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 SENP6Q9GZR1 1112 aaPredicted RBP10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 TMEM117Q9H0C3 514 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 INTS2Q9H0H0 1204 aaKnown RBP10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 COQ4Q9Y3A0 265 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 SQORQ9Y6N5 450 aa10.11□□□□□ -0.79
CNEP1R1-206ENST00000565556 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 GPR182O15218 404 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 HSF2BPO75031 334 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 NOL4O94818 638 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 LCA5LO95447 670 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 STAG3L1P0CL83 205 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 UCHL3P15374 230 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 FGFR4P22455 802 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 THPOP40225 353 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 TNFSF9P41273 254 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 GRM5P41594 1212 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 MGAT3Q09327 533 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 NNTQ13423 1086 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 EPC2Q52LR7 807 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CCDC181Q5TID7 509 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ALS2CLQ60I27 953 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 PACS2Q86VP3 889 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CREG2Q8IUH2 290 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 WDR49Q8IV35 697 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 FMNL3Q8IVF7 1028 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CD302Q8IX05 232 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 USP38Q8NB14 1042 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 FBXL13Q8NEE6 735 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 TMEM40Q8WWA1 233 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 SYN2Q92777 582 aaPredicted RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ACAP3Q96P50 834 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 POP1Q99575 1024 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 SH3GL2Q99962 352 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CAPS2Q9BXY5 557 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 GANQ9H2C0 597 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CHST12Q9NRB3 414 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 TRMT13Q9NUP7 481 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 PLAGL2Q9UPG8 496 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 EBAG9O00559 213 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 EIF3HO15372 352 aaKnown RBP eCLIP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 B4GALT4O60513 344 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZC3H11AO75152 810 aaKnown RBP eCLIP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CHRNA1P02708 482 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 PAFAH1B1P43034 410 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CDK7P50613 346 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 IRAK1P51617 712 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 KIF11P52732 1056 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 LBX1P52954 281 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 POLR2FP61218 127 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CYP27A1Q02318 531 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 APBA1Q02410 837 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ENOX2Q16206 610 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 DUOXA2Q1HG44 320 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 TRIM71Q2Q1W2 868 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZACNQ401N2 412 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 SEZ6Q53EL9 994 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 GLE1Q53GS7 698 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 DPY19L2P1Q6NXN4 242 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 C15orf39Q6ZRI6 1047 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 SV2AQ7L0J3 742 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 RRAGAQ7L523 313 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CDR2LQ86X02 465 aaPredicted RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 LMO3Q8TAP4 145 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 WNT8BQ93098 351 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CAVIN3Q969G5 261 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ARMC5Q96C12 935 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZNF333Q96JL9 665 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 FAM81BQ96LP2 452 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 GDAP1L1Q96MZ0 367 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 OSBPL9Q96SU4 736 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 TRIM6Q9C030 488 aaPredicted RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 ASB7Q9H672 318 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 PLEKHA5Q9HAU0 1116 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 STIM2Q9P246 746 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 APEX2Q9UBZ4 518 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 PIN4Q9Y237 131 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 NOC2LQ9Y3T9 749 aaKnown RBP10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 PCDHA13Q9Y5I0 950 aa10.1□□□□□ -0.79
CNEP1R1-206ENST00000565556 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 ANK1P16157 1881 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 CITO14578 2027 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 ZNF263O14978 683 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 EPHB6O15197 1021 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 SGPL1O95470 568 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 NPTXRO95502 500 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 MYCP01106 439 aaPredicted RBP10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 TNNC2P02585 160 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 C4BPAP04003 597 aaKnown RBP10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 ACTN1P12814 892 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 OSTNP61366 133 aa10.09□□□□□ -0.79
CNEP1R1-206ENST00000565556 SFMBT2Q5VUG0 894 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms