RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 NIF3L1Q9GZT8 377 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 LZTFL1Q9NQ48 299 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 TUBGCP4Q9UGJ1 667 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 TFR2Q9UP52 801 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 SQORQ9Y6N5 450 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 PQBP1O60828 265 aaKnown RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 OFD1O75665 1012 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 KRT5P13647 590 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 SELPP16109 830 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 ARHGAP25P42331 645 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 PTPN14Q15678 1187 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 ZBTB6Q15916 424 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 PKN2Q16513 984 aaKnown RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 XKR4Q5GH76 650 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 SCARA5Q6ZMJ2 495 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 LRRC8DQ7L1W4 858 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 KIAA1328Q86T90 577 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 UBR7Q8N806 425 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 BEST2Q8NFU1 509 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 LNX1Q8TBB1 728 aaPredicted RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 DIS3LQ8TF46 1054 aaKnown RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 TAF4BQ92750 862 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 IFIH1Q9BYX4 1025 aaKnown RBP12.08□□□□□ -0.48
SNX29-204ENST00000564791 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 POLIQ9UNA4 740 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 AGAP1Q9UPQ3 857 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 PCDHA13Q9Y5I0 950 aa12.08□□□□□ -0.48
SNX29-204ENST00000564791 SCN5AQ14524 2016 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 SMIM28A0A1B0GU29 152 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 MEIS3P2A8K0S8 358 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 DDX3XO00571 662 aaKnown RBP eCLIP12.07□□□□□ -0.48
SNX29-204ENST00000564791 ABL1P00519 1130 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 ITGA4P13612 1032 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 KCNE1P15382 129 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 ATICP31939 592 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 MAGEA1P43355 309 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 ASPAP45381 313 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 VAV2P52735 878 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 RBP5P82980 135 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 BFSP2Q13515 415 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
SNX29-204ENST00000564791 SLC39A5Q6ZMH5 540 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 NOP9Q86U38 636 aaKnown RBP12.07□□□□□ -0.48
SNX29-204ENST00000564791 SLC47A2Q86VL8 602 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 VPS36Q86VN1 386 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 HACE1Q8IYU2 909 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 LPPQ93052 612 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 JAKMIP2Q96AA8 810 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 AGPAT1Q99943 283 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 ADAM2Q99965 735 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 ACP6Q9NPH0 428 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 NXF1Q9UBU9 619 aaKnown RBP12.07□□□□□ -0.48
SNX29-204ENST00000564791 TRIM10Q9UDY6 481 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 NOCTQ9UK39 431 aaKnown RBP12.07□□□□□ -0.48
SNX29-204ENST00000564791 UBQLN1Q9UMX0 589 aaKnown RBP12.07□□□□□ -0.48
SNX29-204ENST00000564791 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 PCDHB4Q9Y5E5 795 aa12.07□□□□□ -0.48
SNX29-204ENST00000564791 KIAA0100Q14667 2235 aaKnown RBP12.06□□□□□ -0.48
SNX29-204ENST00000564791 PTGESO14684 152 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 PPEF2O14830 753 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 TLR3O15455 904 aaKnown RBP12.06□□□□□ -0.48
SNX29-204ENST00000564791 CALCAP01258 141 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 TNNT1P13805 278 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 RAB27AP51159 221 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 ARHGAP29Q52LW3 1261 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 ZNF667Q5HYK9 610 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 TAF3Q5VWG9 929 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 MRPL10Q7Z7H8 261 aaKnown RBP12.06□□□□□ -0.48
SNX29-204ENST00000564791 GLYCTKQ8IVS8 523 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 SLC30A5Q8TAD4 765 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 HPDLQ96IR7 371 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 ZFP42Q96MM3 310 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 TSPAN18Q96SJ8 248 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 LACRTQ9GZZ8 138 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 VRTNQ9H8Y1 702 aa12.06□□□□□ -0.48
SNX29-204ENST00000564791 R3HCC1Q9Y3T6 440 aaKnown RBP12.06□□□□□ -0.48
SNX29-204ENST00000564791 TDRD15B5MCY1 1934 aaKnown RBP12.06□□□□□ -0.48
SNX29-204ENST00000564791 STAU1O95793 577 aaKnown RBP12.05□□□□□ -0.48
SNX29-204ENST00000564791 COL6A1P12109 1028 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 CYP11B1P15538 503 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
SNX29-204ENST00000564791 CHRNB2P17787 502 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 CD58P19256 250 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 TNFAIP3P21580 790 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 IBSPP21815 317 aaPredicted RBP12.05□□□□□ -0.48
SNX29-204ENST00000564791 MLH1P40692 756 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 RAP1GAPP47736 663 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 GJA8P48165 433 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 PDE6CP51160 858 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 SOX4Q06945 474 aaPredicted RBP12.05□□□□□ -0.48
SNX29-204ENST00000564791 WDR72Q3MJ13 1102 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
SNX29-204ENST00000564791 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 AGMOQ6ZNB7 445 aa12.05□□□□□ -0.48
SNX29-204ENST00000564791 ZNF662Q6ZS27 426 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms