RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PPP3CAQ08209 521 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 ZNF211Q13398 564 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SPARCL1Q14515 664 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 ACAP1Q15027 740 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 KYAT1Q16773 422 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 KLHL38Q2WGJ6 581 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 TNFAIP8L3Q5GJ75 292 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 CYB5D1Q6P9G0 228 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 C4orf22Q6V702 233 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 CENPUQ71F23 418 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 CCDC25Q86WR0 208 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 PHF13Q86YI8 300 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 DAW1Q8N136 415 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 TMEM161BQ8NDZ6 487 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 OR2W6PQ8NHA6 318 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 DEPTORQ8TB45 409 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 ZNF398Q8TD17 642 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SYTL5Q8TDW5 730 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 ALG3Q92685 438 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 MARVELD3Q96A59 401 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 FAM167AQ96KS9 214 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 PRMT6Q96LA8 375 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 ZNF317Q96PQ6 595 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 RMDN3Q96TC7 470 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 TMEM134Q9H6X4 195 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 IFT122Q9HBG6 1241 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 VEZTQ9HBM0 779 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SLC38A10Q9HBR0 1119 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SSU72Q9NP77 194 aaKnown RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 KCNK9Q9NPC2 374 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 NRBP2Q9NSY0 501 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 GRHL1Q9NZI5 618 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SLC24A2Q9UI40 661 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 ADGRA3Q8IWK6 1321 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 DDX39AO00148 427 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 DHX15O43143 795 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 TOMM70O94826 608 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SGPL1O95470 568 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 PIGRP01833 764 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ATP5BP06576 529 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 KRT7P08729 469 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 RARAP10276 462 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 PYGMP11217 842 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ITGB5P18084 799 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CCND1P24385 295 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 TMOD1P28289 359 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 COPB2P35606 906 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 NAMPTP43490 491 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 NPTX2P47972 431 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SNAP25P60880 206 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CLDN10P78369 228 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 AUHQ13825 339 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 COG2Q14746 738 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 MORF4L2Q15014 288 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 PGM5Q15124 567 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CNGA2Q16280 664 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZC3H12AQ5D1E8 599 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZFYVE27Q5T4F4 411 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 LGSNQ5TDP6 509 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 DCAF12L1Q5VU92 463 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 FAM160B1Q5W0V3 765 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 RNF43Q68DV7 783 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZNF772Q68DY9 489 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 KCNV1Q6PIU1 500 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZDHHC24Q6UX98 284 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SPATA21Q7Z572 469 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ARHGEF19Q8IW93 802 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 FUKQ8N0W3 1084 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ARHGAP24Q8N264 748 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZCCHC9Q8N567 271 aaKnown RBP8.1□□□□□ -1.11
ATXN3-249ENST00000564606 TMEM35BQ8NCS4 154 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 DNERQ8NFT8 737 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 HELQQ8TDG4 1101 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CKAP2Q8WWK9 683 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 TCP11Q8WWU5 503 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 GLG1Q92896 1179 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CCDC127Q96BQ5 260 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SMC6Q96SB8 1091 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 PDCD2LQ9BRP1 358 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 CBWD1Q9BRT8 395 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZBED2Q9BTP6 218 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ZNF341Q9BYN7 854 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 DCLK3Q9C098 648 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 C2orf40Q9H1Z8 148 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 NEUROG2Q9H2A3 272 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 SEMA4AQ9H3S1 761 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 PXMP2Q9NR77 195 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 STK32BQ9NY57 414 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 ADAM22Q9P0K1 906 aa8.1□□□□□ -1.11
ATXN3-249ENST00000564606 AGO2Q9UKV8 859 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms