RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 ACTN4O43707 911 aaKnown RBP14.53□□□□□ -0.08
CLK3-216ENST00000564468 BRCC3P46736 316 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 SPAG1Q07617 926 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 PSMD2Q13200 908 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 CUL4BQ13620 913 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 SPATA1Q5VX52 437 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 JADE1Q6IE81 842 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 PRSS55Q6UWB4 352 aaPredicted RBP14.53□□□□□ -0.08
CLK3-216ENST00000564468 CD300LGQ6UXG3 332 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 C15orf39Q6ZRI6 1047 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 FSIP1Q8NA03 581 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 C3orf58Q8NDZ4 430 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 CMASQ8NFW8 434 aaPredicted RBP14.53□□□□□ -0.08
CLK3-216ENST00000564468 PAGE5Q96GU1 130 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 SUSD3Q96L08 255 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 FAM213AQ9BRX8 229 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 APOL5Q9BWW9 433 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 MAN1C1Q9NR34 630 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 CGNQ9P2M7 1197 aaKnown RBP14.53□□□□□ -0.08
CLK3-216ENST00000564468 MTRRQ9UBK8 725 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 TUBGCP4Q9UGJ1 667 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 BACE2Q9Y5Z0 518 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 TRIOO75962 3097 aa14.52□□□□□ -0.08
CLK3-216ENST00000564468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.52□□□□□ -0.09
CLK3-216ENST00000564468 TGM5O43548 720 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 EXTL3O43909 919 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 TKTP29401 623 aaKnown RBP14.52□□□□□ -0.09
CLK3-216ENST00000564468 NDUFA8P51970 172 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 EHHADHQ08426 723 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 KANK3Q6NY19 840 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 LILRA6Q6PI73 481 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 RTL10Q7L3V2 364 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 EPM2AIP1Q7L775 607 aaPredicted RBP14.52□□□□□ -0.09
CLK3-216ENST00000564468 HS2ST1Q7LGA3 356 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 GPR149Q86SP6 731 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 GLYCTKQ8IVS8 523 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 BRSK2Q8IWQ3 736 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 GPD1LQ8N335 351 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 CACTINQ8WUQ7 758 aaKnown RBP14.52□□□□□ -0.09
CLK3-216ENST00000564468 CHAMP1Q96JM3 812 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 PRRX2Q99811 253 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 CLSTN3Q9BQT9 956 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 OXCT2Q9BYC2 517 aaPredicted RBP14.52□□□□□ -0.09
CLK3-216ENST00000564468 FGFBP2Q9BYJ0 223 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 RHOBTB2Q9BYZ6 727 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 EXOC1Q9NV70 894 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
CLK3-216ENST00000564468 NR2E1Q9Y466 385 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 DENND4AQ7Z401 1863 aa14.52□□□□□ -0.09
CLK3-216ENST00000564468 CCDC195A0A1B0GUA6 201 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 RPL17P18621 184 aaKnown RBP14.51□□□□□ -0.09
CLK3-216ENST00000564468 CASP1P29466 404 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 RAB33AQ14088 237 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 SURF1Q15526 300 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 VARS2Q5ST30 1063 aaKnown RBP14.51□□□□□ -0.09
CLK3-216ENST00000564468 LIN9Q5TKA1 542 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 CRELD2Q6UXH1 353 aaPredicted RBP14.51□□□□□ -0.09
CLK3-216ENST00000564468 TMC5Q6UXY8 1006 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 C12orf76Q8N812 135 aaPredicted RBP14.51□□□□□ -0.09
CLK3-216ENST00000564468 KREMEN2Q8NCW0 462 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 GOLGA5Q8TBA6 731 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 HPS3Q969F9 1004 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 SAAL1Q96ER3 474 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 IKZF4Q9H2S9 585 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 PCIF1Q9H4Z3 704 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 GDPD2Q9HCC8 539 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 SLC39A2Q9NP94 309 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 RBAKQ9NYW8 714 aaPredicted RBP14.51□□□□□ -0.09
CLK3-216ENST00000564468 PCDHB8Q9UN66 801 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 C5orf42Q9H799 3197 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 DOCK6Q96HP0 2047 aa14.51□□□□□ -0.09
CLK3-216ENST00000564468 ZNF233A6NK53 670 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 LOC730098B7Z3J9 87 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 I3L4J1 428 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 M0QZQ0 153 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 ZNF202O95125 648 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 KIF20AO95235 890 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 NFICP08651 508 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 OR1D2P34982 312 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 BMT2Q1RMZ1 405 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 UVSSAQ2YD98 709 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 C9orf57Q5W0N0 161 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 ZNF280DQ6N043 979 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 DSTYKQ6XUX3 929 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 KRBA2Q6ZNG9 492 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 HFE2Q6ZVN8 426 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 USP37Q86T82 979 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 GRAMD1CQ8IYS0 662 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 GLIS3Q8NEA6 775 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
CLK3-216ENST00000564468 SCFD1Q8WVM8 642 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 RPGRIP1Q96KN7 1286 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 CBWD1Q9BRT8 395 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 DPP3Q9NY33 737 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 CDY1Q9Y6F8 540 aa14.5□□□□□ -0.09
CLK3-216ENST00000564468 GOLGA8IPA6NC78 632 aa14.49□□□□□ -0.09
CLK3-216ENST00000564468 GOLGA8JA6NMD2 632 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms