RNA–Protein interactions for RNA: ENST00000563318.1

FANCA-210, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-210ENST00000563318 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
FANCA-210ENST00000563318 TTPALQ9BTX7 342 aa13.36□□□□□ -0.27
FANCA-210ENST00000563318 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
FANCA-210ENST00000563318 RPF1Q9H9Y2 349 aaKnown RBP13.36□□□□□ -0.27
FANCA-210ENST00000563318 CD320Q9NPF0 282 aa13.36□□□□□ -0.27
FANCA-210ENST00000563318 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
FANCA-210ENST00000563318 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
FANCA-210ENST00000563318 UBQLN1Q9UMX0 589 aaKnown RBP13.36□□□□□ -0.27
FANCA-210ENST00000563318 SSX2IPQ9Y2D8 614 aa13.36□□□□□ -0.27
FANCA-210ENST00000563318 M0QZQ0 153 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 PIRO00625 290 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 ADAM12O43184 909 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 EXTL3O43909 919 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 RHOBTB3O94955 611 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
FANCA-210ENST00000563318 MLLT3P42568 568 aaPredicted RBP13.35□□□□□ -0.27
FANCA-210ENST00000563318 GUCY2FP51841 1108 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 SNRPFP62306 86 aaKnown RBP13.35□□□□□ -0.27
FANCA-210ENST00000563318 ZP2Q05996 745 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 SPAG1Q07617 926 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 KMT5BQ4FZB7 885 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 PRSS55Q6UWB4 352 aaPredicted RBP13.35□□□□□ -0.27
FANCA-210ENST00000563318 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
FANCA-210ENST00000563318 POMGNT1Q8WZA1 660 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 KCTD10Q9H3F6 313 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 SLC39A2Q9NP94 309 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 USP15Q9Y4E8 981 aaPredicted RBP13.35□□□□□ -0.27
FANCA-210ENST00000563318 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
FANCA-210ENST00000563318 SYN3O14994 580 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 KIAA0391O15091 583 aaKnown RBP13.34□□□□□ -0.27
FANCA-210ENST00000563318 SPTLC1O15269 473 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 RPN1P04843 607 aaKnown RBP13.34□□□□□ -0.27
FANCA-210ENST00000563318 DSG2Q14126 1118 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 BMS1Q14692 1282 aaKnown RBP13.34□□□□□ -0.27
FANCA-210ENST00000563318 KCNB1Q14721 858 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 CLUL1Q15846 466 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 SCARA3Q6AZY7 606 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 SLC8B1Q6J4K2 584 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 STXBP4Q6ZWJ1 553 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 NT5DC4Q86YG4 428 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
FANCA-210ENST00000563318 CMASQ8NFW8 434 aaPredicted RBP13.34□□□□□ -0.27
FANCA-210ENST00000563318 HDAC7Q8WUI4 952 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 SAAL1Q96ER3 474 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 BORCS6Q96GS4 357 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 UHRF1Q96T88 793 aaPredicted RBP13.34□□□□□ -0.27
FANCA-210ENST00000563318 EMILIN2Q9BXX0 1053 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 ADAM7Q9H2U9 754 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 DZANK1Q9NVP4 752 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 DMAC2Q9NW81 257 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 PRKAG3Q9UGI9 489 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 CDH22Q9UJ99 828 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 BACE2Q9Y5Z0 518 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 PTPRJQ12913 1337 aa13.34□□□□□ -0.27
FANCA-210ENST00000563318 I3L4J1 428 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 C2CD2LO14523 706 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 TGM5O43548 720 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 IL18RAPO95256 599 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 LDHAP00338 332 aaKnown RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 ADH1AP07327 375 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 RPL17P18621 184 aaKnown RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.28
FANCA-210ENST00000563318 MCCD1P59942 119 aaPredicted RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 CREMQ03060 361 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 PSMD2Q13200 908 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 RAB33AQ14088 237 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 CBX2Q14781 532 aaPredicted RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 TMEM132DQ14C87 1099 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 PSMD5Q16401 504 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 KNOP1Q1ED39 458 aaKnown RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 C9orf57Q5W0N0 161 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 GPD1LQ8N335 351 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 ZNF707Q96C28 371 aaPredicted RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 TIGD1Q96MW7 591 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 FAM213AQ9BRX8 229 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 HSPBP1Q9NZL4 362 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 CHMP5Q9NZZ3 219 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.28
FANCA-210ENST00000563318 FBXW11Q9UKB1 542 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 TSC2P49815 1807 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 DENND4AQ7Z401 1863 aa13.33□□□□□ -0.28
FANCA-210ENST00000563318 TCF20Q9UGU0 1960 aaKnown RBP13.32□□□□□ -0.28
FANCA-210ENST00000563318 HAX1O00165 279 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 DLL1O00548 723 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 DPYSL4O14531 572 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 TRAPPC3O43617 180 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 GADD45BO75293 160 aaPredicted RBP13.32□□□□□ -0.28
FANCA-210ENST00000563318 KLRC2P26717 231 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 LILRA4P59901 499 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 ITIH3Q06033 890 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 ZCWPW2Q504Y3 356 aa13.32□□□□□ -0.28
FANCA-210ENST00000563318 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms