RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 HOXA2O43364 376 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 ZC3H11AO75152 810 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDH11-207ENST00000563255 THP07101 528 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 SLC9A1P19634 815 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 MLH1P40692 756 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 BIRC3Q13489 604 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 FIGNQ5HY92 759 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 DPY19L2P1Q6NXN4 242 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 NPAS4Q8IUM7 802 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 RNF169Q8NCN4 708 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 BEST2Q8NFU1 509 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 TAS1R2Q8TE23 839 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 ZFP42Q96MM3 310 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 PPP1R10Q96QC0 940 aaKnown RBP15.9■□□□□ 0.14
CDH11-207ENST00000563255 UHRF1Q96T88 793 aaPredicted RBP15.9■□□□□ 0.14
CDH11-207ENST00000563255 CRACR2AQ9BSW2 395 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 CERS4Q9HA82 394 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 DPP3Q9NY33 737 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 IMPACTQ9P2X3 320 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 ITGA11Q9UKX5 1188 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 LRFN2Q9ULH4 789 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 DAAM1Q9Y4D1 1078 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 CHD7Q9P2D1 2997 aa15.9■□□□□ 0.14
CDH11-207ENST00000563255 KIAA1671Q9BY89 1806 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 RFXAPO00287 272 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 PHACTR2O75167 634 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 VNN1O95497 513 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 CST3P01034 146 aaPredicted RBP15.89■□□□□ 0.13
CDH11-207ENST00000563255 HLA-DRAP01903 254 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 CA3P07451 260 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 GRIK3Q13003 919 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 TRIM14Q14142 442 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 NAB2Q15742 525 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 TRIM65Q6PJ69 517 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 GLB1LQ6UWU2 654 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDH11-207ENST00000563255 TMC6Q7Z403 805 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 DRC7Q8IY82 874 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 C1orf127Q8N9H9 656 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 CXorf38Q8TB03 319 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 SEMA4DQ92854 862 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 PCMTD1Q96MG8 357 aaPredicted RBP15.89■□□□□ 0.13
CDH11-207ENST00000563255 EDEM3Q9BZQ6 932 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 RNF19AQ9NV58 838 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 KANSL3Q9P2N6 904 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 FBXL5Q9UKA1 691 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 XIRP2A4UGR9 3374 aa15.89■□□□□ 0.13
CDH11-207ENST00000563255 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
CDH11-207ENST00000563255 AMHP03971 560 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 ITGB3P05106 788 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 LRPAP1P30533 357 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 ATICP31939 592 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 PIK3CAP42336 1068 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 KLK7P49862 253 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 SCNN1GP51170 649 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 CCDC173Q0VFZ6 552 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 TBX2Q13207 712 aaPredicted RBP15.88■□□□□ 0.13
CDH11-207ENST00000563255 TRPC3Q13507 836 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 NCOA4Q13772 614 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 SKIV2LQ15477 1246 aaKnown RBP15.88■□□□□ 0.13
CDH11-207ENST00000563255 PTPN21Q16825 1174 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 SGSM1Q2NKQ1 1148 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 GLRA4Q5JXX5 417 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 CLLU1OSQ5K130 101 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 NEK11Q8NG66 645 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 URGCPQ8TCY9 931 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 HELQQ8TDG4 1101 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 TAF4BQ92750 862 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 TOP1MTQ969P6 601 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 FAXDC2Q96IV6 333 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 FAM84AQ96KN4 292 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 FAM81BQ96LP2 452 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
CDH11-207ENST00000563255 INTS2Q9H0H0 1204 aaKnown RBP15.88■□□□□ 0.13
CDH11-207ENST00000563255 SIX2Q9NPC8 291 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 SIX4Q9UIU6 781 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 BDP1A6H8Y1 2624 aa15.88■□□□□ 0.13
CDH11-207ENST00000563255 COL4A6Q14031 1691 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 ANO9A1A5B4 782 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 PIRO00625 290 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 NOL4O94818 638 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 ASS1P00966 412 aaKnown RBP15.87■□□□□ 0.13
CDH11-207ENST00000563255 TRIM21P19474 475 aaKnown RBP15.87■□□□□ 0.13
CDH11-207ENST00000563255 IBSPP21815 317 aaPredicted RBP15.87■□□□□ 0.13
CDH11-207ENST00000563255 RFX1P22670 979 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 AFF1P51825 1210 aaKnown RBP15.87■□□□□ 0.13
CDH11-207ENST00000563255 WDR5P61964 334 aaKnown RBP15.87■□□□□ 0.13
CDH11-207ENST00000563255 RBP5P82980 135 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 NOMO2Q5JPE7 1267 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 WDR44Q5JSH3 913 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 KLHDC7AQ5VTJ3 777 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 CCDC150Q8NCX0 1101 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 PHOSPHO2Q8TCD6 241 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 C18orf25Q96B23 403 aaPredicted RBP15.87■□□□□ 0.13
CDH11-207ENST00000563255 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 SLC9A7Q96T83 725 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 IMPG2Q9BZV3 1241 aa15.87■□□□□ 0.13
CDH11-207ENST00000563255 TTYH3Q9C0H2 523 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms