RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SMNDC1O75940 238 aaKnown RBP eCLIP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 UNGP13051 313 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 CA4P22748 312 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 CCNHP51946 323 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 RAD23BP54727 409 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 NR1H3Q13133 447 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 CEP128Q6ZU80 1094 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 LDHDQ86WU2 507 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 RHOT1Q8IXI2 618 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 TRIM11Q96F44 468 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 ADAM33Q9BZ11 813 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 KIAA1683Q9H0B3 1180 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 VPS37BQ9H9H4 285 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 AVENQ9NQS1 362 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 NEU2Q9Y3R4 380 aa14.82□□□□□ -0.04
VPS9D1-202ENST00000561976 PROSCO94903 275 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 KLF1Q13351 362 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 PKN2Q16513 984 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 XKR9Q5GH70 373 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 KAZNQ674X7 775 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 MIS18BP1Q6P0N0 1132 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 LONP2Q86WA8 852 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 ZCCHC9Q8N567 271 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 POMGNT1Q8WZA1 660 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 FAM84AQ96KN4 292 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 RANBP17Q9H2T7 1088 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 RNPEPL1Q9HAU8 725 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 KIAA1586Q9HCI6 787 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 EURLQ9NYK6 297 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 TBX20Q9UMR3 447 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 RBBP6Q7Z6E9 1792 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 MYBL1P10243 752 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 TAS2R40P59535 323 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 HHATQ5VTY9 493 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 PCNX4Q63HM2 1172 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 USP37Q86T82 979 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 C11orf70Q9BRQ4 267 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 C1orf112Q9NSG2 853 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 KLHL11Q9NVR0 708 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 TCEAL9Q9UHQ7 104 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 ZNF148Q9UQR1 794 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 ATRNL1Q5VV63 1379 aa14.81□□□□□ -0.04
VPS9D1-202ENST00000561976 ABHD2P08910 425 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 FDX1P10109 184 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 CALB2P22676 271 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 RPA3P35244 121 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 CCNG1P51959 295 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 NCKAP1LP55160 1127 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 BLMHQ13867 455 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 LIN9Q5TKA1 542 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 PLA2G4FQ68DD2 849 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 RELL1Q8IUW5 271 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 PASD1Q8IV76 773 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 ARMC2Q8NEN0 867 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 NUDCD1Q96RS6 583 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 MRIQ9BWK5 157 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 ST6GALNAC4Q9H4F1 302 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 LRRC37AA6NMS7 1700 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 DENND3A2RUS2 1198 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 H0Y3Z8 333 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 PPP1R12AO14974 1030 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 MAGEB2O15479 319 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 SSTR3P32745 418 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 PCK1P35558 622 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 CETN2P41208 172 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 RASSF2P50749 326 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 STRIP1Q5VSL9 837 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 FAM13CQ8NE31 585 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 TBC1D10AQ9BXI6 508 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 OSBPL1AQ9BXW6 950 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 FBXO28Q9NVF7 368 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 CYP39A1Q9NYL5 469 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 CORO1CQ9ULV4 474 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 TMX2Q9Y320 296 aa14.8□□□□□ -0.04
VPS9D1-202ENST00000561976 PI4K2BG5E9Z4 385 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 PSTPIP1O43586 416 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 CBX6O95503 412 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ZSCAN5DPP0CG00 497 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 NPR1P16066 1061 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 KLRC2P26717 231 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 EPHB2P29323 1055 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 MOGSQ13724 837 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 IL31RAQ8NI17 732 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 TMC2Q8TDI7 906 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 STK32AQ8WU08 396 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 INPP5DQ92835 1189 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 FOXP3Q9BZS1 431 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 SMG5Q9UPR3 1016 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 PCDHB2Q9Y5E7 798 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 MYPNQ86TC9 1320 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 DHX15O43143 795 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 PRPF4O43172 522 aaKnown RBP eCLIP14.79□□□□□ -0.044e-7■■■■□ 25.8
VPS9D1-202ENST00000561976 EDF1O60869 148 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 PEX11AO75192 247 aa14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 ATF7P17544 494 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-202ENST00000561976 GCAP28676 217 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms