RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TRIM6Q9C030 488 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 SEPT11Q9NVA2 429 aaKnown RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 SIX4Q9UIU6 781 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 PIN4Q9Y237 131 aaKnown RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 CDY2AQ9Y6F7 541 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 CAPN6Q9Y6Q1 641 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 GRIN2DO15399 1336 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 UMODL1Q5DID0 1318 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 P4HA1P13674 534 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 ACLYP53396 1101 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 TUBB4BP68371 445 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 RBP5P82980 135 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 CXorf38Q8TB03 319 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 UBE2Q2Q8WVN8 375 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 RFFLQ8WZ73 363 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 PCDHB18PQ96TA0 734 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 EIF2AQ9BY44 585 aaKnown RBP18.34■□□□□ 0.53
HDDC3-206ENST00000561036 SENP6Q9GZR1 1112 aaPredicted RBP18.34■□□□□ 0.53
HDDC3-206ENST00000561036 CYP3A43Q9HB55 503 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 CHST12Q9NRB3 414 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 SNTG2Q9NY99 539 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 SAR1BQ9Y6B6 198 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 RALGAPA2Q2PPJ7 1873 aa18.34■□□□□ 0.53
HDDC3-206ENST00000561036 CAND2O75155 1236 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 FTLP02792 175 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-206ENST00000561036 ATP1A1P05023 1023 aaKnown RBP18.33■□□□□ 0.52
HDDC3-206ENST00000561036 MMEP08473 750 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 GRK4P32298 578 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 HADHBP55084 474 aaKnown RBP18.33■□□□□ 0.52
HDDC3-206ENST00000561036 MGAT3Q09327 533 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 PTK7Q13308 1070 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 ITGA7Q13683 1181 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 PTGISQ16647 500 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 CLEC16AQ2KHT3 1053 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 ZNF667Q5HYK9 610 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 UBXN11Q5T124 520 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 TAF3Q5VWG9 929 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 ALKAL1Q6UXT8 129 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 FAM228AQ86W67 206 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 RHOT2Q8IXI1 618 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 TTC39CQ8N584 583 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 CEP112Q8N8E3 955 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 RBBP8NLQ8NC74 664 aaPredicted RBP18.33■□□□□ 0.52
HDDC3-206ENST00000561036 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 MNS1Q8NEH6 495 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 ELMO3Q96BJ8 720 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 KIF12Q96FN5 646 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 BCO2Q9BYV7 579 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 DPP3Q9NY33 737 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 CNTN3Q9P232 1028 aa18.33■□□□□ 0.52
HDDC3-206ENST00000561036 NOC2LQ9Y3T9 749 aaKnown RBP18.33■□□□□ 0.52
HDDC3-206ENST00000561036 BUB1O43683 1085 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 RPS6KA5O75582 802 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 CLSTN1O94985 981 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 ITGB3P05106 788 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 KRT19P08727 400 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 ASPAP45381 313 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 NOP2P46087 812 aaKnown RBP18.32■□□□□ 0.52
HDDC3-206ENST00000561036 GPC5P78333 572 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 ZBTB6Q15916 424 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 LHX8Q68G74 356 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 ACAD10Q6JQN1 1059 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 TMEM270Q6UE05 265 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 PALB2Q86YC2 1186 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 SYCE1Q8N0S2 351 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 BEST2Q8NFU1 509 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 TPCN2Q8NHX9 752 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 SEZ6LQ9BYH1 1024 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 CISHQ9NSE2 258 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 SNX12Q9UMY4 172 aa18.32■□□□□ 0.52
HDDC3-206ENST00000561036 GRID2IPA4D2P6 1211 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 TMCO5BA8MYB1 307 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 GPR182O15218 404 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 XPOTO43592 962 aaKnown RBP18.31■□□□□ 0.52
HDDC3-206ENST00000561036 PALMO75781 387 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 RECQL4O94761 1208 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 CHRNA1P02708 482 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
HDDC3-206ENST00000561036 KCNE1P15382 129 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 TCP1P17987 556 aaKnown RBP18.31■□□□□ 0.52
HDDC3-206ENST00000561036 GNA15P30679 374 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 FAM26DQ5JW98 314 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 SLFN11Q7Z7L1 901 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 HACE1Q8IYU2 909 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 TRIM11Q96F44 468 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 HPDLQ96IR7 371 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 GLT1D1Q96MS3 346 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 CARD6Q9BX69 1037 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 ACP6Q9NPH0 428 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 TAS2R14Q9NYV8 317 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 HYOU1Q9Y4L1 999 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.31■□□□□ 0.52
HDDC3-206ENST00000561036 SQORQ9Y6N5 450 aa18.31■□□□□ 0.52
HDDC3-206ENST00000561036 CITO14578 2027 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 EFCAB8A8MWE9 144 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 ENC1O14682 589 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 MTA2O94776 668 aa18.3■□□□□ 0.52
HDDC3-206ENST00000561036 CD4P01730 458 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms