RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ZSCAN5CA6NGD5 496 aaPredicted RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 MAPK13O15264 365 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SLC37A4O43826 429 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 FARP2O94887 1054 aaPredicted RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ECEL1O95672 775 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 OAS1P00973 400 aaKnown RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 PGK2P07205 417 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 KRT13P13646 458 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 CCNB1P14635 433 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 TNFAIP3P21580 790 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SCP2P22307 547 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 CCND3P30281 292 aaPredicted RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 STX2P32856 288 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 CETN2P41208 172 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 DNA2P51530 1060 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 JAM2P57087 298 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SNRPFP62306 86 aaKnown RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 CNGA2Q16280 664 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 QPCTQ16769 361 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 GALNTL6Q49A17 601 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 TNFAIP8L3Q5GJ75 292 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 PCNX4Q63HM2 1172 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 BZW1Q7L1Q6 419 aaKnown RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 HS2ST1Q7LGA3 356 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ZNF571Q7Z3V5 609 aaPredicted RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 TBC1D1Q86TI0 1168 aaPredicted RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 GPBP1Q86WP2 473 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ETNPPLQ8TBG4 499 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SYTL5Q8TDW5 730 aaPredicted RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 MICAL1Q8TDZ2 1067 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ZFAND2BQ8WV99 257 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 DNAJC19Q96DA6 116 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 TRIM11Q96F44 468 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 MAML3Q96JK9 1138 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 TTC25Q96NG3 672 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ELAC2Q9BQ52 826 aaKnown RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 AP1M1Q9BXS5 423 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 KCTD10Q9H3F6 313 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 HOMER2Q9NSB8 354 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ZDHHC18Q9NUE0 388 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SMARCAL1Q9NZC9 954 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 ZFATQ9P243 1243 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 STOML1Q9UBI4 398 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SMG5Q9UPR3 1016 aaKnown RBP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 FRMD4BQ9Y2L6 1034 aa9.11□□□□□ -0.95
CCDC33-209ENST00000560565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCDC33-209ENST00000560565 IGLV3-22A0A075B6J6 115 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 KLHL33A6NCF5 533 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 MEIS1O00470 390 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 NFIBO00712 420 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 MAFGO15525 162 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 RIPK2O43353 540 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 CAND2O75155 1236 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 CDH16O75309 829 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 MTA2O94776 668 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 UNC5CO95185 931 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 ZWINTO95229 277 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 NPTXRO95502 500 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 IGHA2P01877 340 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 SKIP12755 728 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 ACADSP16219 412 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 CTNNA2P26232 953 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PON1P27169 355 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 HOXA13P31271 388 aaPredicted RBP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PLTPP55058 493 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 RPS6P62753 249 aaKnown RBP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 ARID5AQ03989 594 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PRPF4BQ13523 1007 aaKnown RBP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 STAT4Q14765 748 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 TAF11Q15544 211 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 ZNF792Q3KQV3 632 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 CEP55Q53EZ4 464 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 FYB2Q5VWT5 728 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 SLC30A9Q6PML9 568 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 UBE2Q1Q7Z7E8 422 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 SDCCAG8Q86SQ7 713 aaPredicted RBP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 USP37Q86T82 979 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 FAM228AQ86W67 206 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 LRRC34Q8IZ02 419 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PPFIBP2Q8ND30 876 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 DNERQ8NFT8 737 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 HAS1Q92839 578 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 ART4Q93070 314 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 HPS3Q969F9 1004 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 LENG9Q96B70 501 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 TRAPPC9Q96Q05 1148 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PRMT1Q99873 361 aaKnown RBP9.1□□□□□ -0.95
CCDC33-209ENST00000560565 HTATIP2Q9BUP3 242 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 WDR11Q9BZH6 1224 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 FAM192AQ9GZU8 254 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 LRMDAQ9H2I8 198 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 PRO3102Q9H379 93 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 AZI2Q9H6S1 392 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 OLFML3Q9NRN5 406 aa9.1□□□□□ -0.95
CCDC33-209ENST00000560565 GCNT4Q9P109 453 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms