RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 STRNO43815 780 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 GZMAP12544 262 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 ZNF157P51786 506 aaPredicted RBP15.06■□□□□ 0
CARMIL3-203ENST00000560349 PPFIA1Q13136 1202 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 TFDP1Q14186 410 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 FAM110CQ1W6H9 321 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 TSHZ1Q6ZSZ6 1077 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 CASKIN2Q8WXE0 1202 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 IMPG2Q9BZV3 1241 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 C2orf40Q9H1Z8 148 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 CXCL16Q9H2A7 254 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 VIPAS39Q9H9C1 493 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 PTPRHQ9HD43 1115 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 ANAPC7Q9UJX3 599 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 PCDHB2Q9Y5E7 798 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 KIAA0391O15091 583 aaKnown RBP15.06■□□□□ 0
CARMIL3-203ENST00000560349 ZC3H11AO75152 810 aaKnown RBP eCLIP15.06■□□□□ 0
CARMIL3-203ENST00000560349 MMP3P08254 477 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 ACAD10Q6JQN1 1059 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 FOXR1Q6PIV2 292 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 ACTRT1Q8TDG2 376 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 VTI1AQ96AJ9 217 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 MED4Q9NPJ6 270 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 RNF14Q9UBS8 474 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 TMEM59LQ9UK28 342 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 HPCAL4Q9UM19 191 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 MGAMO43451 1857 aa15.06■□□□□ 0
CARMIL3-203ENST00000560349 TCRBV7S2A1N4TA0A589 114 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 O00370 1275 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 GAS2O43903 313 aaKnown RBP15.05■□□□□ 0
CARMIL3-203ENST00000560349 UNGP13051 313 aaPredicted RBP15.05■□□□□ 0
CARMIL3-203ENST00000560349 ARF4P18085 180 aaPredicted RBP15.05■□□□□ 0
CARMIL3-203ENST00000560349 PROZP22891 400 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 AARSP49588 968 aaKnown RBP eCLIP15.05■□□□□ 0
CARMIL3-203ENST00000560349 CDH8P55286 799 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 TRPC3Q13507 836 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 GRIK4Q16099 956 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 MARCH8Q5T0T0 291 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 WDR49Q8IV35 697 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 KIAA0319LQ8IZA0 1049 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 AENQ8WTP8 325 aaKnown RBP15.05■□□□□ 0
CARMIL3-203ENST00000560349 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ 0
CARMIL3-203ENST00000560349 FAM204AQ9H8W3 233 aa15.05■□□□□ 0
CARMIL3-203ENST00000560349 FEZ2Q9UHY8 353 aaPredicted RBP15.05■□□□□ 0
CARMIL3-203ENST00000560349 TTI1O43156 1089 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 ASS1P00966 412 aaKnown RBP15.05■□□□□ -0
CARMIL3-203ENST00000560349 CYP2B6P20813 491 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 GJC1P36383 396 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 TNNC1P63316 161 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 DUOXA2Q1HG44 320 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 MAP9Q49MG5 647 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 MTHFD1LQ6UB35 978 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 ENOSF1Q7L5Y1 443 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 TSEN2Q8NCE0 465 aaKnown RBP15.05■□□□□ -0
CARMIL3-203ENST00000560349 TRIM51Q9BSJ1 452 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 GTF3C4Q9UKN8 822 aa15.05■□□□□ -0
CARMIL3-203ENST00000560349 ATP8B3O60423 1300 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 RNF40O75150 1001 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 PHKA2P46019 1235 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 NSFP46459 744 aaKnown RBP15.04■□□□□ -0
CARMIL3-203ENST00000560349 TAF1CQ15572 869 aaPredicted RBP15.04■□□□□ -0
CARMIL3-203ENST00000560349 AMHR2Q16671 573 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 ZNF699Q32M78 642 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 DUSP28Q4G0W2 176 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 LEKR1Q6ZMV7 388 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 MCOLN2Q8IZK6 566 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 ZSWIM1Q9BR11 485 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
CARMIL3-203ENST00000560349 CDHR5Q9HBB8 845 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 LACTBL1A8MY62 500 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 CYP1A2P05177 515 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 STAG3L1P0CL83 205 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 PYGMP11217 842 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 BEX3Q00994 111 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 TNFAIP2Q03169 654 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 ZNF484Q5JVG2 852 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 JADE1Q6IE81 842 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 DPH5Q9H2P9 285 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 ACBD3Q9H3P7 528 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 ABHD16BQ9H3Z7 469 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 PDZD7Q9H5P4 517 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 CISHQ9NSE2 258 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 CWC15Q9P013 229 aaKnown RBP15.04■□□□□ -0
CARMIL3-203ENST00000560349 SLC45A1Q9Y2W3 748 aa15.04■□□□□ -0
CARMIL3-203ENST00000560349 MROH7Q68CQ1 1323 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 PPFIA4O75335 1185 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 SCP2P22307 547 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 MCM3P25205 808 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 HLTFQ14527 1009 aaKnown RBP eCLIP15.03■□□□□ -0
CARMIL3-203ENST00000560349 OLFML2BQ68BL8 750 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 ZDHHC14Q8IZN3 488 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 ABRAQ8N0Z2 381 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 RASGEF1CQ8N431 466 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 RPF1Q9H9Y2 349 aaKnown RBP15.03■□□□□ -0
CARMIL3-203ENST00000560349 HES2Q9Y543 173 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 RPS6KA5O75582 802 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 ITGB3P05106 788 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 MAPK4P31152 587 aa15.03■□□□□ -0
CARMIL3-203ENST00000560349 FKBP1BP68106 108 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms