RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 INTUQ9ULD6 942 aa11.4□□□□□ -0.58
CRTC3-209ENST00000560320 PTPN22Q9Y2R2 807 aa11.4□□□□□ -0.58
CRTC3-209ENST00000560320 REXO2Q9Y3B8 237 aaKnown RBP11.4□□□□□ -0.58
CRTC3-209ENST00000560320 PCDHB4Q9Y5E5 795 aa11.4□□□□□ -0.58
CRTC3-209ENST00000560320 A0A087X0T9 212 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 A0A1W2PQ45 241 aaPredicted RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 A0A1W2PQY0 241 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 TLR3O15455 904 aaKnown RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 PJA2O43164 708 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 NFICP08651 508 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 H2AFZP0C0S5 128 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 FAM228BP0C875 321 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 PNMA6AP0CW24 399 aaPredicted RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 MYL6P60660 151 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 RBP5P82980 135 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 NFX1Q12986 1120 aaKnown RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 SLC10A6Q3KNW5 377 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 LHX8Q68G74 356 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 H2AFVQ71UI9 128 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 FAM228AQ86W67 206 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 EFCAB13Q8IY85 973 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 USP38Q8NB14 1042 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 SH3TC2Q8TF17 1288 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 KAT5Q92993 513 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 SNX27Q96L92 541 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 SENP6Q9GZR1 1112 aaPredicted RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 DNAI2Q9GZS0 605 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 DPP3Q9NY33 737 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 PHF24Q9UPV7 400 aa11.39□□□□□ -0.59
CRTC3-209ENST00000560320 NOC2LQ9Y3T9 749 aaKnown RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.39□□□□□ -0.59
CRTC3-209ENST00000560320 CTAGE9A4FU28 777 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ARVCFO00192 962 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ZNF263O14978 683 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 CYP26A1O43174 497 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ITGB3P05106 788 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 SKIP12755 728 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ATF7P17544 494 aaPredicted RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ARHGAP25P42331 645 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 TNNC1P63316 161 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 MYO1EQ12965 1108 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 PAK2Q13177 524 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 SPOPLQ6IQ16 392 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 PPP1R2P3Q6NXS1 205 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ZNF677Q86XU0 584 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 RPUSD2Q8IZ73 545 aaKnown RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 TTC39CQ8N584 583 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 RNF10Q8N5U6 811 aaKnown RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 TRIM58Q8NG06 486 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 TMEM40Q8WWA1 233 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 NOX5Q96PH1 765 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 NAPGQ99747 312 aaPredicted RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 EIF2AQ9BY44 585 aaKnown RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 UBQLN1Q9UMX0 589 aaKnown RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 NUB1Q9Y5A7 615 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 PCDHB2Q9Y5E7 798 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 SQORQ9Y6N5 450 aa11.38□□□□□ -0.59
CRTC3-209ENST00000560320 LAMA2P24043 3122 aaKnown RBP11.38□□□□□ -0.59
CRTC3-209ENST00000560320 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 TDRD15B5MCY1 1934 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 MACROD2A1Z1Q3 448 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 DNM1LO00429 736 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 DDX3XO00571 662 aaKnown RBP eCLIP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 RECQL4O94761 1208 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 URI1O94763 535 aaPredicted RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 SGPL1O95470 568 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CST3P01034 146 aaPredicted RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CD4P01730 458 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CHRNA1P02708 482 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 ITGA4P13612 1032 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 POLR2BP30876 1174 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 RAB27AP51159 221 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CDR2Q01850 454 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 MGAT3Q09327 533 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 FAM26DQ5JW98 314 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 FBXO47Q5MNV8 452 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 GLYCTKQ8IVS8 523 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 SLC35F6Q8N357 371 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 C1orf127Q8N9H9 656 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 RBBP8NLQ8NC74 664 aaPredicted RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CTNNBL1Q8WYA6 563 aaPredicted RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 FAM84AQ96KN4 292 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CALR3Q96L12 384 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 RPS6KC1Q96S38 1066 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 UNC93B1Q9H1C4 597 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 NXF3Q9H4D5 531 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 FAM124BQ9H5Z6 455 aaPredicted RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CYP3A43Q9HB55 503 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 APOBEC3GQ9HC16 384 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 TRMT13Q9NUP7 481 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 CNTN3Q9P232 1028 aa11.37□□□□□ -0.59
CRTC3-209ENST00000560320 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
CRTC3-209ENST00000560320 AGAP1Q9UPQ3 857 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms