RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 USP37Q86T82 979 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 APPL2Q8NEU8 664 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 CMASQ8NFW8 434 aaPredicted RBP8.89□□□□□ -0.99
SNX1-207ENST00000559401 SLC7A14Q8TBB6 771 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 HDAC7Q8WUI4 952 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 LEO1Q8WVC0 666 aaPredicted RBP8.89□□□□□ -0.99
SNX1-207ENST00000559401 SUSD3Q96L08 255 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 FGFBP2Q9BYJ0 223 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 PCIF1Q9H4Z3 704 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 TMEM206Q9H813 350 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 ZDHHC7Q9NXF8 308 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 SERTAD1Q9UHV2 236 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 FBXW11Q9UKB1 542 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 RCOR1Q9UKL0 485 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 KCNH3Q9ULD8 1083 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 ZDHHC9Q9Y397 364 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 VCANP13611 3396 aa8.89□□□□□ -0.99
SNX1-207ENST00000559401 A0A1B0GVL5 298 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 PRRG1O14668 218 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 CCL16O15467 120 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 XYLBO75191 536 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 IL18RAPO95256 599 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 LDHAP00338 332 aaKnown RBP8.88□□□□□ -0.99
SNX1-207ENST00000559401 CPB1P15086 417 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 PFKFB1P16118 471 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 CYP3A5P20815 502 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 COL9A1P20849 921 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 GARTP22102 1010 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 LRPAP1P30533 357 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 TFAMQ00059 246 aaKnown RBP8.88□□□□□ -0.99
SNX1-207ENST00000559401 ROR1Q01973 937 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 YWHAHQ04917 246 aaPredicted RBP8.88□□□□□ -0.99
SNX1-207ENST00000559401 RAB33AQ14088 237 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 PTPN21Q16825 1174 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 SPATA1Q5VX52 437 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 UNC13DQ70J99 1090 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 GET4Q7L5D6 327 aaPredicted RBP8.88□□□□□ -0.99
SNX1-207ENST00000559401 OTOP3Q7RTS5 596 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 NELFCDQ8IXH7 590 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 GRAMD1CQ8IYS0 662 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 PLCD3Q8N3E9 789 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 GLIS3Q8NEA6 775 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 TSPAN18Q96SJ8 248 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 C7orf25Q9BPX7 421 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 CBWD1Q9BRT8 395 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 LRFN3Q9BTN0 628 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 STRA6Q9BX79 667 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 PRKD2Q9BZL6 878 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 ASB7Q9H672 318 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 RBAKQ9NYW8 714 aaPredicted RBP8.88□□□□□ -0.99
SNX1-207ENST00000559401 PCDHB8Q9UN66 801 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 TIMM13Q9Y5L4 95 aaPredicted RBP8.88□□□□□ -0.99
SNX1-207ENST00000559401 BACE2Q9Y5Z0 518 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 STYXL1Q9Y6J8 313 aa8.88□□□□□ -0.99
SNX1-207ENST00000559401 TSC2P49815 1807 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 PPEF2O14830 753 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 EIF3DO15371 548 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNX1-207ENST00000559401 GPR37L1O60883 481 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 C1RP00736 705 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 LRG1P02750 347 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 ASGR2P07307 311 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 HNRNPA1P09651 372 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNX1-207ENST00000559401 ODC1P11926 461 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 ADSSP30520 456 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 SYKP43405 635 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 ZXDAP98168 799 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 MTMR3Q13615 1198 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 CUL4BQ13620 913 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 ZBTB6Q15916 424 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 C9orf57Q5W0N0 161 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 CRELD2Q6UXH1 353 aaPredicted RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 RSPO2Q6UXX9 243 aaPredicted RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 CYP26C1Q6V0L0 522 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 GRASPQ7Z6J2 395 aaPredicted RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 BRSK2Q8IWQ3 736 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 EFCAB13Q8IY85 973 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 GPD1LQ8N335 351 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 EDAQ92838 391 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 ZNF707Q96C28 371 aaPredicted RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 SCAND2PQ9GZW5 306 aaPredicted RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 CYP4F11Q9HBI6 524 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 WDR6Q9NNW5 1121 aaKnown RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 C11orf16Q9NQ32 467 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 EXOC1Q9NV70 894 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 DPP3Q9NY33 737 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 LIMD1Q9UGP4 676 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 FBXL5Q9UKA1 691 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 SORCS3Q9UPU3 1222 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 USTQ9Y2C2 406 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 DERAQ9Y315 318 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 R3HCC1Q9Y3T6 440 aaKnown RBP8.87□□□□□ -0.99
SNX1-207ENST00000559401 C2CD2Q9Y426 696 aa8.87□□□□□ -0.99
SNX1-207ENST00000559401 UBE4BO95155 1302 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 ARHGEF37A1IGU5 675 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 WDR27A2RRH5 827 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 GOLGA6L4A6NEF3 574 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 PRR33A8MZF0 331 aa8.86□□□□□ -0.99
SNX1-207ENST00000559401 EXTL3O43909 919 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms