RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SPATA1Q5VX52 437 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 JADE1Q6IE81 842 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 ZNF280DQ6N043 979 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 SYCE2Q6PIF2 218 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 TMC5Q6UXY8 1006 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 DSTYKQ6XUX3 929 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 CCDC149Q6ZUS6 474 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 OTOP3Q7RTS5 596 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PALB2Q86YC2 1186 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 GLYCTKQ8IVS8 523 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 VN1R2Q8NFZ6 395 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 ZNF461Q8TAF7 563 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 LNX1Q8TBB1 728 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 SLC22A17Q8WUG5 538 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 SUSD6Q92537 303 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 C18orf25Q96B23 403 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 ACSF2Q96CM8 615 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 SAAL1Q96ER3 474 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 PAGE5Q96GU1 130 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 SUSD3Q96L08 255 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 B3GALT6Q96L58 329 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 FNBP1Q96RU3 617 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 STRA6Q9BX79 667 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 HAPLN2Q9GZV7 340 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 S1PR5Q9H228 398 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 CXCL16Q9H2A7 254 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 BLZF1Q9H2G9 400 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 SLC39A2Q9NP94 309 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 MAN1C1Q9NR34 630 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 RYDENQ9NUL5 291 aaKnown RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 ZDHHC7Q9NXF8 308 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 RBAKQ9NYW8 714 aaPredicted RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 CGNQ9P2M7 1197 aaKnown RBP4.74□□□□□ -1.65
SNX1-205ENST00000559339 MTRRQ9UBK8 725 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 SERTAD1Q9UHV2 236 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 DSEQ9UL01 958 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 MAFFQ9ULX9 164 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 USTQ9Y2C2 406 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 ZDHHC9Q9Y397 364 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 BACE2Q9Y5Z0 518 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 CDY1Q9Y6F8 540 aa4.74□□□□□ -1.65
SNX1-205ENST00000559339 UBE4BO95155 1302 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 NLRC5Q86WI3 1866 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 TISP43B9A030 160 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ANKRD63C9JTQ0 380 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 PI4K2BG5E9Z4 385 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 PRRG1O14668 218 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 DCXO43602 365 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 FAM189A1O60320 539 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 PRPF40AO75400 957 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 ZMYND10O75800 440 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ZNF202O95125 648 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 TNNC2P02585 160 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 C8AP07357 584 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ADRB2P07550 413 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 NFICP08651 508 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 KRT19P08727 400 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 HNRNPA1P09651 372 aaKnown RBP eCLIP4.73□□□□□ -1.65
SNX1-205ENST00000559339 TMEM191BP0C7N4 346 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 SPATA31D3P0C874 917 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ODC1P11926 461 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 CPB1P15086 417 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ATF2P15336 505 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 RPL17P18621 184 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 TNNI1P19237 187 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 SP100P23497 879 aaPredicted RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 TKTP29401 623 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 ADSSP30520 456 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 HOXA9P31269 272 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 BRCC3P46736 316 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 TAF6P49848 677 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 NDUFA8P51970 172 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ARPP19P56211 112 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 LILRA4P59901 499 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 TFAMQ00059 246 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 MYO1EQ12965 1108 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 CUL4BQ13620 913 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 RAB33AQ14088 237 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 SURF1Q15526 300 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ZBTB6Q15916 424 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 DUOXA2Q1HG44 320 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 CTXN3Q4LDR2 81 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 VARS2Q5ST30 1063 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 ZBTB41Q5SVQ8 909 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 C9orf57Q5W0N0 161 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 OVOS1Q6IE37 1185 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 IQCEQ6IPM2 695 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 SLC8B1Q6J4K2 584 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 SLC39A4Q6P5W5 647 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 PRSS55Q6UWB4 352 aaPredicted RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 SPATA31D4Q6ZUB0 917 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 GPR149Q86SP6 731 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 METTL23Q86XA0 190 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 THEM5Q8N1Q8 247 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 GPD1LQ8N335 351 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 ELMOD1Q8N336 334 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 C12orf76Q8N812 135 aaPredicted RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 FSIP1Q8NA03 581 aa4.73□□□□□ -1.65
SNX1-205ENST00000559339 TDRD5Q8NAT2 981 aaKnown RBP4.73□□□□□ -1.65
SNX1-205ENST00000559339 XXYLT1Q8NBI6 393 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms