RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 ATF2P15336 505 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 BLMHQ13867 455 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 LRIG3Q6UXM1 1119 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 ZNF662Q6ZS27 426 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 ANKMY2Q8IV38 441 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 TEKT4Q8WW24 435 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 C12orf65Q9H3J6 166 aaKnown RBP12.89□□□□□ -0.35
SEC11A-206ENST00000558924 KDM4CQ9H3R0 1056 aa12.89□□□□□ -0.35
SEC11A-206ENST00000558924 A0A0G2JND7 137 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 K7ERI5 159 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 CA4P22748 312 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 NSFP46459 744 aaKnown RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 HHATQ5VTY9 493 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 KRT39Q6A163 491 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 SV2AQ7L0J3 742 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 SCYL3Q8IZE3 742 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 PLEKHO2Q8TD55 490 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 KIFAP3Q92845 792 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 NLRP4Q96MN2 994 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 PCDHB18PQ96TA0 734 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 CDC42EP4Q9H3Q1 356 aaKnown RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 NQO1P15559 274 aaKnown RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 IRX4P78413 519 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 PRKCEQ02156 737 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 DCAF12L1Q5VU92 463 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 DCUN1D2Q6PH85 259 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 BSNDQ8WZ55 320 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 STMN4Q9H169 189 aaPredicted RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 SLCO1B3Q9NPD5 702 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 RNF19AQ9NV58 838 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 SUCLA2Q9P2R7 463 aaPredicted RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 LAMB1P07942 1786 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 CHKAP35790 457 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 RAD23BP54727 409 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 NCALDP61601 193 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 BTNL9Q6UXG8 535 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 FBXL13Q8NEE6 735 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 RPS6KC1Q96S38 1066 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 RIT2Q99578 217 aa12.88□□□□□ -0.35
SEC11A-206ENST00000558924 USP15Q9Y4E8 981 aaPredicted RBP12.88□□□□□ -0.35
SEC11A-206ENST00000558924 RFC5P40937 340 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CPA2P48052 419 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 BRDTQ58F21 947 aaPredicted RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CWF19L1Q69YN2 538 aaKnown RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 LRRC57Q8N9N7 239 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 IMPG2Q9BZV3 1241 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 SAYSD1Q9NPB0 183 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CHST7Q9NS84 486 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 TBC1D22BQ9NU19 505 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 RAB20Q9NX57 234 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 ADAM22Q9P0K1 906 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 NRAPQ86VF7 1730 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CEP350Q5VT06 3117 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 EXOC1LA0A1B0GW35 172 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 MUM1Q2TAK8 710 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 ERMARDQ5T6L9 678 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 AGBL2Q5U5Z8 902 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 ANO7Q6IWH7 933 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 ANO5Q75V66 913 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CD302Q8IX05 232 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 NAF1Q96HR8 494 aaKnown RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CYTH2Q99418 400 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 MSTO1Q9BUK6 570 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 SLC12A4Q9UP95 1085 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 RARAP10276 462 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CCND2P30279 289 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 ITGA8P53708 1063 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CCDC60Q8IWA6 550 aaPredicted RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 PRELID2Q8N945 189 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 CRYGNQ8WXF5 182 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 ATP6V0A1Q93050 837 aa12.87□□□□□ -0.35
SEC11A-206ENST00000558924 JPH1Q9HDC5 661 aaPredicted RBP12.87□□□□□ -0.35
SEC11A-206ENST00000558924 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
SEC11A-206ENST00000558924 COL22A1Q8NFW1 1626 aaPredicted RBP12.86□□□□□ -0.35
SEC11A-206ENST00000558924 C5orf60A6NFR6 353 aa12.86□□□□□ -0.35
SEC11A-206ENST00000558924 WDR46O15213 610 aaKnown RBP12.86□□□□□ -0.35
SEC11A-206ENST00000558924 CBX6O95503 412 aa12.86□□□□□ -0.35
SEC11A-206ENST00000558924 BAG2O95816 211 aa12.86□□□□□ -0.35
SEC11A-206ENST00000558924 POTEJP0CG39 1038 aa12.86□□□□□ -0.35
SEC11A-206ENST00000558924 ATP2A2P16615 1042 aaKnown RBP12.86□□□□□ -0.35
SEC11A-206ENST00000558924 RRM1P23921 792 aa12.86□□□□□ -0.35
SEC11A-206ENST00000558924 BAG6P46379 1132 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms