RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 STK39Q9UEW8 545 aa11.18□□□□□ -0.62
TPM1-212ENST00000558347 MYH11P35749 1972 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 EFCAB8A8MWE9 144 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 K7ERI5 159 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 C2CD2LO14523 706 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 DCXO43602 365 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 GPR37L1O60883 481 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 CNPP09543 421 aaKnown RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 HOXB8P17481 243 aaPredicted RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 COL9A1P20849 921 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 GUCY2CP25092 1073 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 PPP1R2P41236 205 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 DMP1Q13316 513 aaPredicted RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 TRIM14Q14142 442 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 CBX2Q14781 532 aaPredicted RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 NAB2Q15742 525 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 DCAF4L1Q3SXM0 396 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 DYMQ7RTS9 669 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 PPFIBP1Q86W92 1011 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 RNF135Q8IUD6 432 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 CCDC65Q8IXS2 484 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 CEP120Q8N960 986 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 MED15Q96RN5 788 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 ACO2Q99798 780 aaKnown RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 TIPINQ9BVW5 301 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 GPR62Q9BZJ7 368 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 MRPL17Q9NRX2 175 aaKnown RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 SAMSN1Q9NSI8 373 aaKnown RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 EXOC1Q9NV70 894 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 LIMA1Q9UHB6 759 aaKnown RBP11.17□□□□□ -0.62
TPM1-212ENST00000558347 MUTYHQ9UIF7 546 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 TNFSF13BQ9Y275 285 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 GDAQ9Y2T3 454 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
TPM1-212ENST00000558347 TRIP11Q15643 1979 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 SPDYE4A6NLX3 237 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 SLC16A4O15374 487 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 TADA3O75528 432 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 URODP06132 367 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 WEE2P0C1S8 567 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 ALADP13716 330 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 CASQ1P31415 396 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 GLUD2P49448 558 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 CLCN4P51793 760 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 TUBB4BP68371 445 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 TUSC3Q13454 348 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 TMEM31Q5JXX7 168 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 RARS2Q5T160 578 aaKnown RBP11.16□□□□□ -0.62
TPM1-212ENST00000558347 KIAA0319Q5VV43 1072 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 FUT10Q6P4F1 479 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 MNS1Q8NEH6 495 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 RPGRIP1Q96KN7 1286 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 B3GALT6Q96L58 329 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 REEP2Q9BRK0 252 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 COLEC11Q9BWP8 271 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 ADAM7Q9H2U9 754 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 PTPRHQ9HD43 1115 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 CHST7Q9NS84 486 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 RWDD2AQ9UIY3 292 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 PRDM4Q9UKN5 801 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 ADAM28Q9UKQ2 775 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 ODF2LQ9ULJ1 636 aa11.16□□□□□ -0.62
TPM1-212ENST00000558347 CASTOR2A6NHX0 329 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 ABLIM1O14639 778 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 TEX28O15482 410 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 KIF20AO95235 890 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 KIF4AO95239 1232 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.62
TPM1-212ENST00000558347 THP07101 528 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 CCDC175P0C221 793 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 PLS3P13797 630 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 IDEP14735 1019 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
TPM1-212ENST00000558347 GAP43P17677 238 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 SP100P23497 879 aaPredicted RBP11.15□□□□□ -0.62
TPM1-212ENST00000558347 KLRC2P26717 231 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 ZNF131P52739 623 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 DSG1Q02413 1049 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 ITIH3Q06033 890 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 CNGA4Q8IV77 575 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 ADSSL1Q8N142 457 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 TMEM161BQ8NDZ6 487 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 ANKRD20A12PQ8NF67 263 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 HASPINQ8TF76 798 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 SPIRE2Q8WWL2 714 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 UBXN4Q92575 508 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 NTPCRQ9BSD7 190 aaKnown RBP11.15□□□□□ -0.62
TPM1-212ENST00000558347 TARS2Q9BW92 718 aaKnown RBP11.15□□□□□ -0.62
TPM1-212ENST00000558347 EMILIN2Q9BXX0 1053 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 MRPL4Q9BYD3 311 aaKnown RBP11.15□□□□□ -0.62
TPM1-212ENST00000558347 CDT1Q9H211 546 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 POMKQ9H5K3 350 aa11.15□□□□□ -0.62
TPM1-212ENST00000558347 C17orf75Q9HAS0 396 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms