RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 PSMD10O75832 226 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 APBB3O95704 486 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 EGFP01133 1207 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 THP07101 528 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 LIFRP42702 1097 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 DGKEP52429 567 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 PSMC5P62195 406 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 MBTD1Q05BQ5 628 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 TWF1Q12792 350 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 GRSF1Q12849 480 aaKnown RBP eCLIP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 LMAN2Q12907 356 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 SEMA3BQ13214 749 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 EMC2Q15006 297 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 ARHGAP29Q52LW3 1261 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 SLC27A1Q6PCB7 646 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 HAUS6Q7Z4H7 955 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 ARID3BQ8IVW6 561 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 UBL7Q96S82 380 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 MBD1Q9UIS9 605 aaPredicted RBP13.86□□□□□ -0.19
PSEN1-220ENST00000557037 PTPN13Q12923 2485 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
PSEN1-220ENST00000557037 ZMYM2Q9UBW7 1377 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 A0A1W2PRU2 124 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 DPYSL4O14531 572 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 ASAP2O43150 1006 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 B3GAT3O94766 335 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 ATF2P15336 505 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 ENGP17813 658 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 RFC5P40937 340 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 BRCC3P46736 316 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 NAB2Q15742 525 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 ITPRIPL2Q3MIP1 535 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 TMEM196Q5HYL7 178 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 CD300LGQ6UXG3 332 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 CCNI2Q6ZMN8 369 aaPredicted RBP13.85□□□□□ -0.19
PSEN1-220ENST00000557037 PNPLA1Q8N8W4 532 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 MTA3Q9BTC8 594 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 TPSD1Q9BZJ3 242 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 OSBPL3Q9H4L5 887 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 FSCN3Q9NQT6 498 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 DACH1Q9UI36 760 aa13.85□□□□□ -0.19
PSEN1-220ENST00000557037 EPHA5P54756 1037 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
PSEN1-220ENST00000557037 PCBP1Q15365 356 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSEN1-220ENST00000557037 RTN1Q16799 776 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 SLC8B1Q6J4K2 584 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 ARMCX6Q7L4S7 300 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 TCP11Q8WWU5 503 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 GTPBP2Q9BX10 602 aaKnown RBP13.84□□□□□ -0.19
PSEN1-220ENST00000557037 NUSAP1Q9BXS6 441 aaKnown RBP13.84□□□□□ -0.19
PSEN1-220ENST00000557037 GPR88Q9GZN0 384 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 C6orf50Q9HD87 102 aa13.84□□□□□ -0.19
PSEN1-220ENST00000557037 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
PSEN1-220ENST00000557037 EVLQ9UI08 416 aaPredicted RBP13.84□□□□□ -0.19
PSEN1-220ENST00000557037 EML1O00423 815 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 TBX3O15119 743 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 RECQL4O94761 1208 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.2
PSEN1-220ENST00000557037 CLCNKBP51801 687 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 DMC1Q14565 340 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 USP39Q53GS9 565 aaKnown RBP13.83□□□□□ -0.2
PSEN1-220ENST00000557037 B3GNT9Q6UX72 402 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 HDDC3Q8N4P3 179 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 LEMD2Q8NC56 503 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 RPLP0P6Q8NHW5 317 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 ASAP3Q8TDY4 903 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 HNRNPABQ99729 332 aaKnown RBP13.83□□□□□ -0.2
PSEN1-220ENST00000557037 ZMYND12Q9H0C1 365 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 FBRSL1Q9HCM7 1045 aaKnown RBP13.83□□□□□ -0.2
PSEN1-220ENST00000557037 WRAP73Q9P2S5 460 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-220ENST00000557037 EBF1Q9UH73 591 aa13.83□□□□□ -0.2
PSEN1-220ENST00000557037 ADAMTS9Q9P2N4 1935 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 A0A1B0GUA9 196 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 UPK3BL1B0FP48 263 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 UPK3BL2E5RIL1 263 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 QARSP47897 775 aaKnown RBP13.82□□□□□ -0.2
PSEN1-220ENST00000557037 TFDP1Q14186 410 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 GLRA4Q5JXX5 417 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 NAIF1Q69YI7 327 aaPredicted RBP13.82□□□□□ -0.2
PSEN1-220ENST00000557037 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 C3orf58Q8NDZ4 430 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 MTRQ99707 1265 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 TMEM74BQ9NUR3 256 aa13.82□□□□□ -0.2
PSEN1-220ENST00000557037 ESYT2A0FGR8 921 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 TMEM189-UBE2V1I3L0A0 370 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 J3QKU1 62 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 TK2O00142 265 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 TRDMT1O14717 391 aaKnown RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 PRAMEF12O95522 483 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 CFIP05156 583 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 ATXN3P54252 364 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 PLCB2Q00722 1185 aa13.81□□□□□ -0.2
PSEN1-220ENST00000557037 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-220ENST00000557037 CAPSQ13938 189 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms