RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TMEM184AQ6ZMB5 413 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 PRR23BQ6ZRT6 265 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 STOX1Q6ZVD7 989 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 THAP5Q7Z6K1 395 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 RSPH3Q86UC2 560 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 DGKHQ86XP1 1220 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 CMTR2Q8IYT2 770 aaKnown RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 SAMD3Q8N6K7 520 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 TMEM105Q8N8V8 129 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 RBBP8NLQ8NC74 664 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 KREMEN2Q8NCW0 462 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 SREK1Q8WXA9 508 aaKnown RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 MIPEPQ99797 713 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 PDCD2LQ9BRP1 358 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 S1PR5Q9H228 398 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 GMIPQ9P107 970 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 KLHL3Q9UH77 587 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 MRPL42Q9Y6G3 142 aaKnown RBP5.58□□□□□ -1.52
ATXN3-239ENST00000556315 SCN5AQ14524 2016 aa5.58□□□□□ -1.52
ATXN3-239ENST00000556315 NRCAMQ92823 1304 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 KRTAP9-7A8MTY7 169 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 H3BS24 57 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 CCER2I3L3R5 266 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 PER2O15055 1255 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 FOXP2O15409 715 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 GLP2RO95838 553 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 CFBP00751 764 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 FGAP02671 866 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 GHRP10912 638 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 PCP11498 1178 aaKnown RBP5.57□□□□□ -1.52
ATXN3-239ENST00000556315 ATP2B1P20020 1258 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 UBA1P22314 1058 aaKnown RBP5.57□□□□□ -1.52
ATXN3-239ENST00000556315 HSD17B4P51659 736 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 ADAM17P78536 824 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 GHRHRQ02643 423 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 NEDD9Q14511 834 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 LPIN1Q14693 890 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 DUSP6Q16828 381 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 CCDC178Q5BJE1 867 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 CDKAL1Q5VV42 579 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 PRAMEF13Q5VWM6 474 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 ANKRD54Q6NXT1 300 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 CCDC81Q6ZN84 652 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 FAM43BQ6ZT52 329 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-239ENST00000556315 DGLUCYQ7Z3D6 616 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 RTN4RL1Q86UN2 441 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-239ENST00000556315 SLFN12Q8IYM2 578 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 ADGRF4Q8IZF3 695 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 RIN3Q8TB24 985 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 FTHL17Q9BXU8 183 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 CPVLQ9H3G5 476 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 SEMA4AQ9H3S1 761 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 VAT1LQ9HCJ6 419 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 ZNF215Q9UL58 517 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-239ENST00000556315 TPX2Q9ULW0 747 aaKnown RBP5.57□□□□□ -1.52
ATXN3-239ENST00000556315 SORCS3Q9UPU3 1222 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 PCDHB12Q9Y5F1 795 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 SQORQ9Y6N5 450 aa5.57□□□□□ -1.52
ATXN3-239ENST00000556315 MCM3APO60318 1980 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 COL4A6Q14031 1691 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 GREB1LQ9C091 1923 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 TTC41PQ6P2S7 1318 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 ZDBF2Q9HCK1 2354 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 MED19A0JLT2 244 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 SLC22A31A6NKX4 558 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 GCOM1H8Y6P7 765 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 DHX16O60231 1041 aaKnown RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 STAM2O75886 525 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 RPLP2P05387 115 aaKnown RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 POLR2MP0CAP2 368 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 CCND2P30279 289 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 TECP42680 631 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 GIPRP48546 466 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 NT5C2P49902 561 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 ERVFC1P60507 584 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 MGAT3Q09327 533 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 PUM1Q14671 1186 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 PGM5Q15124 567 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 QRICH1Q2TAL8 776 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 GNPTABQ3T906 1256 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 UTP14CQ5TAP6 766 aaKnown RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 VPS53Q5VIR6 699 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 CDCP2Q5VXM1 449 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 TSHZ3Q63HK5 1081 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 OVOS1Q6IE37 1185 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 LETMD1Q6P1Q0 360 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 SYCE2Q6PIF2 218 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 METTL7BQ6UX53 244 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 MFSD6Q6ZSS7 791 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 TSHZ1Q6ZSZ6 1077 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 SYDE1Q6ZW31 735 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-239ENST00000556315 PHACTR4Q8IZ21 702 aa5.56□□□□□ -1.52
ATXN3-239ENST00000556315 VN1R2Q8NFZ6 395 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms