RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 F8W810 466 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 TULP1O00294 542 aaPredicted RBP24.76■■□□□ 1.55
CDKN3-208ENST00000555837 MBTPS2O43462 519 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 MTHFRP42898 656 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 UBE2HP62256 183 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 STK4Q13043 487 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 SMAD2Q15796 467 aaKnown RBP24.76■■□□□ 1.55
CDKN3-208ENST00000555837 RTP2Q5QGT7 225 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 DSTYKQ6XUX3 929 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 TMEM174Q8WUU8 243 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 ANKRD36BP1Q96IX9 119 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 FNBP1Q96RU3 617 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 UHRF1Q96T88 793 aaPredicted RBP24.76■■□□□ 1.55
CDKN3-208ENST00000555837 CACNG4Q9UBN1 327 aa24.76■■□□□ 1.55
CDKN3-208ENST00000555837 PDCD11Q14690 1871 aaKnown RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 TMEM191BP0C7N4 346 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 RPL13P26373 211 aaKnown RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 PPP1R2P41236 205 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 TFAMQ00059 246 aaKnown RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 SPAG1Q07617 926 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 DLX2Q07687 328 aaPredicted RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 SNW1Q13573 536 aaKnown RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 SNRNP35Q16560 246 aaKnown RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 ATAT1Q5SQI0 421 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 ENGASEQ8NFI3 743 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 LNX1Q8TBB1 728 aaPredicted RBP24.75■■□□□ 1.55
CDKN3-208ENST00000555837 SMARCE1Q969G3 411 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 ADAM7Q9H2U9 754 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 MTRRQ9UBK8 725 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 ITGA11Q9UKX5 1188 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 MAFFQ9ULX9 164 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 PCDHB8Q9UN66 801 aa24.75■■□□□ 1.55
CDKN3-208ENST00000555837 MEFVO15553 781 aaPredicted RBP24.74■■□□□ 1.55
CDKN3-208ENST00000555837 TGFB1I1O43294 461 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 EXOC3O60645 756 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 TNNC2P02585 160 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 NFICP08651 508 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 ODC1P11926 461 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 HOXD13P35453 343 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 DUOXA2Q1HG44 320 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 SV2CQ496J9 727 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 LIN9Q5TKA1 542 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 C9orf57Q5W0N0 161 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 ZNF280DQ6N043 979 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 SLC9A9Q8IVB4 645 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 GUF1Q8N442 669 aaKnown RBP24.74■■□□□ 1.55
CDKN3-208ENST00000555837 GLIS3Q8NEA6 775 aa24.74■■□□□ 1.55
CDKN3-208ENST00000555837 GOLGA8IPA6NC78 632 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 GOLGA8JA6NMD2 632 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 M0QZQ0 153 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 BRCC3P46736 316 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 TAF6P49848 677 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 AP3M2P53677 418 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 STIM1Q13586 685 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 CLUL1Q15846 466 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 C15orf39Q6ZRI6 1047 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 METTL23Q86XA0 190 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 KIAA0895Q8NCT3 520 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 C3orf58Q8NDZ4 430 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 CMASQ8NFW8 434 aaPredicted RBP24.73■■□□□ 1.55
CDKN3-208ENST00000555837 VN1R2Q8NFZ6 395 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 IPO9Q96P70 1041 aaKnown RBP24.73■■□□□ 1.55
CDKN3-208ENST00000555837 RHOBTB2Q9BYZ6 727 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 ZDHHC7Q9NXF8 308 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 FRMD4BQ9Y2L6 1034 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 BRWD1Q9NSI6 2320 aa24.73■■□□□ 1.55
CDKN3-208ENST00000555837 ANO9A1A5B4 782 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 PIRO00625 290 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 EPCAMP16422 314 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 TYMPP19971 482 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 TKTP29401 623 aaKnown RBP24.72■■□□□ 1.55
CDKN3-208ENST00000555837 AARSP49588 968 aaKnown RBP eCLIP24.72■■□□□ 1.55
CDKN3-208ENST00000555837 CYP2J2P51589 502 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 LILRA4P59901 499 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 RBP5P82980 135 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 YWHAHQ04917 246 aaPredicted RBP24.72■■□□□ 1.55
CDKN3-208ENST00000555837 MYO1EQ12965 1108 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 RAB33AQ14088 237 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 UVSSAQ2YD98 709 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 VARS2Q5ST30 1063 aaKnown RBP24.72■■□□□ 1.55
CDKN3-208ENST00000555837 PRSS55Q6UWB4 352 aaPredicted RBP24.72■■□□□ 1.55
CDKN3-208ENST00000555837 CCDC149Q6ZUS6 474 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 WDR49Q8IV35 697 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 LRRC52Q8N7C0 313 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 B3GALT6Q96L58 329 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 IKZF4Q9H2S9 585 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 MAN1C1Q9NR34 630 aa24.72■■□□□ 1.55
CDKN3-208ENST00000555837 DLL1O00548 723 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 CLIC2O15247 247 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 CBX2Q14781 532 aaPredicted RBP24.71■■□□□ 1.55
CDKN3-208ENST00000555837 SYCE2Q6PIF2 218 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 CD300LGQ6UXG3 332 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 PALB2Q86YC2 1186 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 ADHFE1Q8IWW8 467 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 GBP4Q96PP9 640 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 TRAF3IP3Q9Y228 551 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 NR2E1Q9Y466 385 aa24.71■■□□□ 1.55
CDKN3-208ENST00000555837 USP15Q9Y4E8 981 aaPredicted RBP24.71■■□□□ 1.55
CDKN3-208ENST00000555837 REV3LO60673 3130 aa24.7■■□□□ 1.54
CDKN3-208ENST00000555837 GOLGA6L22H0YM25 854 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms