RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CEP44Q9C0F1 390 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 LGR6Q9HBX8 967 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 AMFRQ9UKV5 643 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
SIX4-202ENST00000554079 NEU2Q9Y3R4 380 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 RGPD2P0DJD1 1756 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 FRMPD4Q14CM0 1322 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 KLRF2D3W0D1 207 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 K7EPI3 171 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 PODXLO00592 558 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 TP73O15350 636 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 PRPF4O43172 522 aaKnown RBP eCLIP10.09□□□□□ -0.79
SIX4-202ENST00000554079 FBXO21O94952 628 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 KCNA6P17658 529 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 CHRNA3P32297 505 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 RCVRNP35243 200 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 HOXD13P35453 343 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 CETN2P41208 172 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 SPARCL1Q14515 664 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 KRT81Q14533 505 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 NR1D2Q14995 579 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 TLR1Q15399 786 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 SEPT7Q16181 437 aaKnown RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 PHKG1Q16816 387 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 DCAF6Q58WW2 860 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 SLC27A3Q5K4L6 730 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 DTHD1Q6ZMT9 781 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 CCDC25Q86WR0 208 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 AHI1Q8N157 1196 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 CENPSQ8N2Z9 138 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 EFHD2Q96C19 240 aaPredicted RBP10.09□□□□□ -0.79
SIX4-202ENST00000554079 SPZ1Q9BXG8 430 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 GANQ9H2C0 597 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 S100A14Q9HCY8 104 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 RIC8AQ9NPQ8 531 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 GIN1Q9NXP7 522 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 ZSWIM5Q9P217 1185 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 NAGPAQ9UK23 515 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 NAALADL1Q9UQQ1 740 aa10.09□□□□□ -0.79
SIX4-202ENST00000554079 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PRAMEF22A3QJZ6 481 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 TTC34A8MYJ7 566 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 AQP9O43315 295 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 DENRO43583 198 aaKnown RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 ITM2AO43736 263 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PRDM1O75626 825 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 TM7SF2O76062 418 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 BAIAP3O94812 1187 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 CSF1RP07333 972 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 SCG2P13521 617 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PON1P27169 355 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PEX2P28328 305 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 CDK9P50750 372 aaKnown RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 RCAN1P53805 252 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 SLC18A1P54219 525 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 ARHGAP4P98171 946 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 MYBPC1Q00872 1141 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 ARID5AQ03989 594 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 FOLH1Q04609 750 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PTK2Q05397 1052 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 BTKQ06187 659 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 ZBTB17Q13105 803 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PDAP1Q13442 181 aaKnown RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 NDUFA5Q16718 116 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 SHROOM1Q2M3G4 852 aaPredicted RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 PPP2R2DQ66LE6 453 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 RHBDF2Q6PJF5 856 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 CYFIP1Q7L576 1253 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 ANKRD35Q8N283 1001 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PRELID2Q8N945 189 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 ACTRT2Q8TDY3 377 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 DDI1Q8WTU0 396 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 CHPT1Q8WUD6 406 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 CTRCQ99895 268 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 METTL22Q9BUU2 404 aaPredicted RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 UNKQ9C0B0 810 aaKnown RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 CCDC68Q9H2F9 335 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 MAN1C1Q9NR34 630 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 TBC1D23Q9NUY8 699 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 HEY2Q9UBP5 337 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
SIX4-202ENST00000554079 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 NCANO14594 1321 aa10.08□□□□□ -0.8
SIX4-202ENST00000554079 PP2D1A8MPX8 630 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TXNDC9O14530 226 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CIB2O75838 187 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TTC4O95801 387 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 EIF2S1P05198 315 aaKnown RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 UBL4AP11441 157 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 ESRRAP11474 423 aaPredicted RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 KRT13P13646 458 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 CTNNA2P26232 953 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 MZF1P28698 734 aaPredicted RBP10.07□□□□□ -0.8
SIX4-202ENST00000554079 MCM7P33993 719 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 PRKCIP41743 596 aa10.07□□□□□ -0.8
SIX4-202ENST00000554079 TRAPPC10P48553 1259 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms