RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 HPSEQ9Y251 543 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 DERAQ9Y315 318 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 C2CD2Q9Y426 696 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 BACE2Q9Y5Z0 518 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 MTCL1Q9Y4B5 1905 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 EIF3DO15371 548 aaKnown RBP eCLIP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 ADAM12O43184 909 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 ACTN4O43707 911 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 NFICP08651 508 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 SP100P23497 879 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 EHHADHQ08426 723 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 RAB33AQ14088 237 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 RSPO2Q6UXX9 243 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 CYP26C1Q6V0L0 522 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 GRAMD1CQ8IYS0 662 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 TMEM130Q8N3G9 435 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 ZNF507Q8TCN5 953 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 SAAL1Q96ER3 474 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 PAGE5Q96GU1 130 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 CBWD1Q9BRT8 395 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 C1QTNF1Q9BXJ1 281 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 ZDHHC7Q9NXF8 308 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 USP25Q9UHP3 1055 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 NR2E1Q9Y466 385 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 CDY1Q9Y6F8 540 aa11.08□□□□□ -0.64
HNRNPC-208ENST00000553753 FAM237AA0A1B0GTK4 181 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 A0A1W2PQ27 194 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 A0A1W2PQ64 194 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 DCXO43602 365 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 IL18RAPO95256 599 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 PAPLNO95428 1278 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 HOXD13P35453 343 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 SYKP43405 635 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 GUCY2FP51841 1108 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 NDUFA8P51970 172 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 MRPL58Q14197 206 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 SLC8B1Q6J4K2 584 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 EPM2AIP1Q7L775 607 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 ZSWIM2Q8NEG5 633 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 APPL2Q8NEU8 664 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 RHOBTB2Q9BYZ6 727 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 PCIF1Q9H4Z3 704 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 GDPD2Q9HCC8 539 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 FBXW11Q9UKB1 542 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 USTQ9Y2C2 406 aa11.07□□□□□ -0.64
HNRNPC-208ENST00000553753 H7C4K7 107 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 M0QZQ0 153 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 KIAA0391O15091 583 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 EXTL3O43909 919 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 ZMYND10O75800 440 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 MYL1P05976 194 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 AARSP49588 968 aaKnown RBP eCLIP11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 LILRA4P59901 499 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 LIN9Q5TKA1 542 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 C9orf57Q5W0N0 161 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 CCDC149Q6ZUS6 474 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 NT5DC4Q86YG4 428 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 ZNF461Q8TAF7 563 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 SCFD1Q8WVM8 642 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 SLC39A2Q9NP94 309 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 RBAKQ9NYW8 714 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 MUTYHQ9UIF7 546 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
HNRNPC-208ENST00000553753 ANO9A1A5B4 782 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 GOLGA8IPA6NC78 632 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 GOLGA8JA6NMD2 632 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 PIRO00625 290 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 TBC1D4O60343 1298 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 C8AP07357 584 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 PAX3P23760 479 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 YWHAHQ04917 246 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 UVSSAQ2YD98 709 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 DSTYKQ6XUX3 929 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 BRSK2Q8IWQ3 736 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 NOC3LQ8WTT2 800 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 SMG7Q92540 1137 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 ZNF707Q96C28 371 aaPredicted RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 WDR6Q9NNW5 1121 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 DPP3Q9NY33 737 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 FBXL5Q9UKA1 691 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 ANK1P16157 1881 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 UBE4BO95155 1302 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 C2orf16Q68DN1 1984 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 C2CD4DB7Z1M9 353 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 PPEF2O14830 753 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 TGFB1I1O43294 461 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 KLRC4O43908 158 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 ABLIM3O94929 683 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 OAZ2O95190 189 aa11.05□□□□□ -0.64
HNRNPC-208ENST00000553753 HNRNPA1P09651 372 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms