RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 C12orf50Q8NA57 414 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GIMAP8Q8ND71 665 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GIMAP7Q8NHV1 300 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FBLIM1Q8WUP2 373 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SEPT1Q8WYJ6 367 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ACSF2Q96CM8 615 aaPredicted RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RRP36Q96EU6 259 aaKnown RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SENP7Q9BQF6 1050 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MYL10Q9BUA6 226 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SCNM1Q9BWG6 230 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 LSM14BQ9BX40 385 aaKnown RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FTHL17Q9BXU8 183 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 IL25Q9H293 177 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMX1Q9H3N1 280 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SMARCAD1Q9H4L7 1026 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 AZI2Q9H6S1 392 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 NGRNQ9NPE2 291 aaKnown RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ENTPD7Q9NQZ7 604 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEM260Q9NX78 707 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TMEM63CQ9P1W3 806 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CNTN3Q9P232 1028 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 IGSF9Q9P2J2 1179 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KANSL3Q9P2N6 904 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SEC63Q9UGP8 760 aaKnown RBP6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PCDHB7Q9Y5E2 793 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TRPV2Q9Y5S1 764 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 KIAA1671Q9BY89 1806 aa6.33□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DENND4AQ7Z401 1863 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FRMPD4Q14CM0 1322 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM95CA0A1B0GW59 222 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RRN3P2A6NIE6 340 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM170BA6NMN3 283 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 EIF4E1BA6NMX2 242 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MEIS2O14770 477 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GIPC1O14908 333 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CYP26A1O43174 497 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 N4BP1O75113 896 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FGFR1P11362 822 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SRFP11831 508 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TDGF1P13385 188 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RXRAP19793 462 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PBX3P40426 434 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 STARD6P59095 220 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 C19orf57Q0VDD7 668 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TROAPQ12815 778 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PLCB4Q15147 1175 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FAM102BQ5T8I3 360 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DCLRE1AQ6PJP8 1040 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 OTOP3Q7RTS5 596 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TRMT1LQ7Z2T5 733 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CHD1LQ86WJ1 897 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PROSER1Q86XN7 944 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RAB11FIP4Q86YS3 637 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SLC44A3Q8N4M1 653 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SMG8Q8ND04 991 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CTCFLQ8NI51 663 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 GPRASP2Q96D09 838 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CDHR1Q96JP9 859 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TCF25Q9BQ70 676 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CELF4Q9BZC1 486 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PSTPIP2Q9H939 334 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PRMT8Q9NR22 394 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TYW1Q9NV66 732 aaKnown RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SALL4Q9UJQ4 1053 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SOX13Q9UN79 622 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MTF2Q9Y483 593 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 TAF6LQ9Y6J9 622 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SQORQ9Y6N5 450 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PLXNA4Q9HCM2 1894 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PTPN13Q12923 2485 aa6.32□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CACNA1IQ9P0X4 2223 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MYO18BQ8IUG5 2567 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 IGSF9BQ9UPX0 1349 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DDX39AO00148 427 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ARHGAP6O43182 974 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MGEA5O60502 916 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 FOXD2O60548 495 aaPredicted RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CLASP2O75122 1294 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RPS6KA5O75582 802 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PLEKHA8P1O95397 391 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DEKP35659 375 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SARSP49591 514 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SRSF1Q07955 248 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 STPG1Q5TH74 334 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CCDC149Q6ZUS6 474 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 HEATR3Q7Z4Q2 680 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 CELF5Q8N6W0 485 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 COLGALT1Q8NBJ5 622 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RNF169Q8NCN4 708 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 MRPS27Q92552 414 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PGBD1Q96JS3 809 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 PCYT2Q99447 389 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 ADAM2Q99965 735 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 SDF4Q9BRK5 362 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 DDX23Q9BUQ8 820 aaKnown RBP6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 BCO2Q9BYV7 579 aa6.31□□□□□ -1.4
SMARCE1P3-201ENST00000553649 RWDD1Q9H446 243 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms