RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TMEM130Q8N3G9 435 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 ANKLE1Q8NAG6 615 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 BEST2Q8NFU1 509 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 NIF3L1Q9GZT8 377 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 SMIM28A0A1B0GU29 152 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 PITPNM1O00562 1244 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 ZNF623O75123 536 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 OFD1O75665 1012 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 ACO1P21399 889 aaKnown RBP18.88■□□□□ 0.61
PSEN1-206ENST00000553447 RBP5P82980 135 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 CYP27A1Q02318 531 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 GFPT1Q06210 699 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-206ENST00000553447 SLC18A3Q16572 532 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 GLRA4Q5JXX5 417 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 VPS36Q86VN1 386 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 ADAM2Q99965 735 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 SYT11Q9BT88 431 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.88■□□□□ 0.61
PSEN1-206ENST00000553447 VRTNQ9H8Y1 702 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 TUBGCP4Q9UGJ1 667 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 UBQLN1Q9UMX0 589 aaKnown RBP18.88■□□□□ 0.61
PSEN1-206ENST00000553447 AGAP1Q9UPQ3 857 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 TDRD15B5MCY1 1934 aaKnown RBP18.88■□□□□ 0.61
PSEN1-206ENST00000553447 SCN1AP35498 2009 aa18.88■□□□□ 0.61
PSEN1-206ENST00000553447 A0A087X0T9 212 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 CYP26A1O43174 497 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 XPOTO43592 962 aaKnown RBP18.87■□□□□ 0.61
PSEN1-206ENST00000553447 STAU1O95793 577 aaKnown RBP18.87■□□□□ 0.61
PSEN1-206ENST00000553447 FAM228BP0C875 321 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 KRT5P13647 590 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 CLCN1P35523 988 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 SCN5AQ14524 2016 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 ZNF667Q5HYK9 610 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 C1orf53Q5VUE5 145 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 NYAP1Q6ZVC0 841 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 KIAA1328Q86T90 577 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 UBR7Q8N806 425 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 OLIG1Q8TAK6 271 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 DIS3LQ8TF46 1054 aaKnown RBP18.87■□□□□ 0.61
PSEN1-206ENST00000553447 C18orf25Q96B23 403 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-206ENST00000553447 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 IFIH1Q9BYX4 1025 aaKnown RBP18.87■□□□□ 0.61
PSEN1-206ENST00000553447 ADAMTS1Q9UHI8 967 aa18.87■□□□□ 0.61
PSEN1-206ENST00000553447 R3HCC1Q9Y3T6 440 aaKnown RBP18.87■□□□□ 0.61
PSEN1-206ENST00000553447 A0A0U1RQF3 1178 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 A0A0U1RQJ8 604 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 SKIP12755 728 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 ASPAP45381 313 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 BMS1Q14692 1282 aaKnown RBP18.86■□□□□ 0.61
PSEN1-206ENST00000553447 PTPN14Q15678 1187 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 TRIM60Q495X7 471 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 SMYD5Q6GMV2 418 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 ZNF662Q6ZS27 426 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 ATRIPQ8WXE1 791 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 HPDLQ96IR7 371 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 C16orf45Q96MC5 204 aaPredicted RBP18.86■□□□□ 0.61
PSEN1-206ENST00000553447 TOX2Q96NM4 488 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 AGPAT1Q99943 283 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 RNF19AQ9NV58 838 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 NENFQ9UMX5 172 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 POLIQ9UNA4 740 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 CNTN6Q9UQ52 1028 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 GIT1Q9Y2X7 761 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 PCDHB4Q9Y5E5 795 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 PCDHA13Q9Y5I0 950 aa18.86■□□□□ 0.61
PSEN1-206ENST00000553447 MEIS3P2A8K0S8 358 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 DCDC2CA8MYV0 355 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 DDX3XO00571 662 aaKnown RBP eCLIP18.85■□□□□ 0.617e-8■■□□□ 12.8
PSEN1-206ENST00000553447 PTGESO14684 152 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 ATF7P17544 494 aaPredicted RBP18.85■□□□□ 0.61
PSEN1-206ENST00000553447 CYP3A5P20815 502 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 ARHGAP25P42331 645 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 MAGEA1P43355 309 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 VAV2P52735 878 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 AGMOQ6ZNB7 445 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 SLC47A2Q86VL8 602 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 SLC30A5Q8TAD4 765 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 LNX1Q8TBB1 728 aaPredicted RBP18.85■□□□□ 0.61
PSEN1-206ENST00000553447 EPS8L1Q8TE68 723 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 LPPQ93052 612 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 PGBD4Q96DM1 585 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 LZTFL1Q9NQ48 299 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 RGS18Q9NS28 235 aa18.85■□□□□ 0.61
PSEN1-206ENST00000553447 NXF1Q9UBU9 619 aaKnown RBP18.85■□□□□ 0.61
PSEN1-206ENST00000553447 NOCTQ9UK39 431 aaKnown RBP18.85■□□□□ 0.61
PSEN1-206ENST00000553447 ANO9A1A5B4 782 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 NBNO60934 754 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 CYP11B1P15538 503 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 TNFAIP3P21580 790 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 MLH1P40692 756 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 PDE6CP51160 858 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 YWHAEP62258 255 aaKnown RBP18.84■□□□□ 0.61
PSEN1-206ENST00000553447 TLE2Q04725 743 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 FAAP100Q0VG06 881 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 GPNMBQ14956 572 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 WDR72Q3MJ13 1102 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 ARHGAP29Q52LW3 1261 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 C9orf57Q5W0N0 161 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 SCARA5Q6ZMJ2 495 aa18.84■□□□□ 0.61
PSEN1-206ENST00000553447 NOP9Q86U38 636 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms