RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 PLCG1P19174 1290 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 TXLNAP40222 546 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 NBL1P41271 181 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 KARSQ15046 597 aaKnown RBP13.88□□□□□ -0.19
LINC00643-202ENST00000553426 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 IQCEQ6IPM2 695 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 CD302Q8IX05 232 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 KRI1Q8N9T8 703 aaKnown RBP13.88□□□□□ -0.19
LINC00643-202ENST00000553426 ITFG1Q8TB96 612 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 RAD54LQ92698 747 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 DDX12PQ92771 950 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 KCNN1Q92952 543 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 MSTO1Q9BUK6 570 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 TUBGCP4Q9UGJ1 667 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 FBXL5Q9UKA1 691 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 PCDHB8Q9UN66 801 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 SIT1Q9Y3P8 196 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 MYH11P35749 1972 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 CITO14578 2027 aa13.88□□□□□ -0.19
LINC00643-202ENST00000553426 TTC26A0AVF1 554 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 OGTO15294 1046 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 TBC1D4O60343 1298 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 RHOP08100 348 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 PAX3P23760 479 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 DDIT3P35638 169 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 ZNF131P52739 623 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 GPC5P78333 572 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 YWHAHQ04917 246 aaPredicted RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 MRPL58Q14197 206 aaKnown RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 MCM6Q14566 821 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 CYP4A22Q5TCH4 519 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 ST13P5Q8NFI4 369 aaPredicted RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 ING5Q8WYH8 240 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 NKD2Q969F2 451 aaPredicted RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 ZNF512Q96ME7 567 aaPredicted RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 CORO1BQ9BR76 489 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 CCSER1Q9C0I3 900 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 AVENQ9NQS1 362 aaPredicted RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 BLOC1S4Q9NUP1 217 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
LINC00643-202ENST00000553426 INSL5Q9Y5Q6 135 aa13.87□□□□□ -0.19
LINC00643-202ENST00000553426 LACTBL1A8MY62 500 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 PIGRP01833 764 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 LRPAP1P30533 357 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 PRKCQQ04759 706 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 SPAG1Q07617 926 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 ADCY1Q08828 1119 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 CUL4AQ13619 759 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 SPECC1Q5M775 1068 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 SLFN12LQ6IEE8 588 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 DSTYKQ6XUX3 929 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 PDZD4Q76G19 769 aaPredicted RBP13.86□□□□□ -0.19
LINC00643-202ENST00000553426 LEMD2Q8NC56 503 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 BEST2Q8NFU1 509 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 MCRS1Q96EZ8 462 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 KXD1Q9BQD3 176 aa13.86□□□□□ -0.19
LINC00643-202ENST00000553426 RPP25Q9BUL9 199 aaKnown RBP13.86□□□□□ -0.19
LINC00643-202ENST00000553426 A0A0B4J269 797 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 M0QZQ0 153 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 MEFVO15553 781 aaPredicted RBP13.85□□□□□ -0.19
LINC00643-202ENST00000553426 ECI2O75521 394 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 MICAL2O94851 1124 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 OAZ2O95190 189 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 TNFSF9P41273 254 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 STARD6P59095 220 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 GTF2BQ00403 316 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 PLD1Q13393 1074 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 SNW1Q13573 536 aaKnown RBP13.85□□□□□ -0.19
LINC00643-202ENST00000553426 MLF2Q15773 248 aaPredicted RBP13.85□□□□□ -0.19
LINC00643-202ENST00000553426 ZBTB6Q15916 424 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 ENOX2Q16206 610 aaKnown RBP13.85□□□□□ -0.19
LINC00643-202ENST00000553426 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 FRMD5Q7Z6J6 570 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 MAP4K3Q8IVH8 894 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 HAPLN2Q9GZV7 340 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 STK17AQ9UEE5 414 aa13.85□□□□□ -0.19
LINC00643-202ENST00000553426 VPS13AQ96RL7 3174 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 KANSL1LA0AUZ9 987 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 PRR23AA6NEV1 266 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 OR6C75A6NL08 312 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 SEC24AO95486 1093 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 DCNP07585 359 aaKnown RBP13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ODC1P11926 461 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 GRIN1Q05586 938 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 TWF1Q12792 350 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 SLC5A9Q2M3M2 681 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 RRAGBQ5VZM2 374 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ADALQ6DHV7 355 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ARMCX5Q6P1M9 558 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 SV2BQ7L1I2 683 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ASCL5Q7RTU5 278 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 PJA1Q8NG27 643 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ELSPBP1Q96BH3 223 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 EPSTI1Q96J88 318 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 BCO2Q9BYV7 579 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 SEMA4AQ9H3S1 761 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ASB7Q9H672 318 aa13.84□□□□□ -0.19
LINC00643-202ENST00000553426 ZFP14Q9HCL3 533 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms