RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 EFNA5P52803 228 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 YARSP54577 528 aaKnown RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 TWF1Q12792 350 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 SIM2Q14190 667 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 MRPL58Q14197 206 aaKnown RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 TEAD2Q15562 447 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ECM1Q16610 540 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ZNF568Q3ZCX4 644 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 CTXN3Q4LDR2 81 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 CYP4A22Q5TCH4 519 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ALKAL1Q6UXT8 129 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 PRR23CQ6ZRP0 262 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 Q6ZS52 159 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ELMOD1Q8N336 334 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 NSUN7Q8NE18 718 aaKnown RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ERMNQ8TAM6 284 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 ZSCAN18Q8TBC5 510 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 DEPDC1BQ8WUY9 529 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 C18orf25Q96B23 403 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 RSPRY1Q96DX4 576 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 IFT74Q96LB3 600 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 CCDC94Q9BW85 323 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 TRPV5Q9NQA5 729 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 TOPORSQ9NS56 1045 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 SLC38A7Q9NVC3 462 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 NUB1Q9Y5A7 615 aa9.96□□□□□ -0.82
SYNE2-209ENST00000553308 TPRP12270 2363 aaKnown RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 PDCD11Q14690 1871 aaKnown RBP9.96□□□□□ -0.82
SYNE2-209ENST00000553308 SLC38A8A6NNN8 435 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 HEPACAM2A8MVW5 462 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 K7ERI5 159 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 K7ESF4 209 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ZNF263O14978 683 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 MEFVO15553 781 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 LRP3O75074 770 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 OR52Z1P0C646 297 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 KCNA4P22459 653 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 MCM4P33991 863 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 SOX9P48436 509 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 EPHA5P54756 1037 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 PTGDRQ13258 359 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 CSRP2Q16527 193 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ME3Q16798 604 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 TPGS2Q68CL5 300 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 HEATR6Q6AI08 1181 aaKnown RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 IQCEQ6IPM2 695 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ZNF280DQ6N043 979 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 RNF19BQ6ZMZ0 732 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 TAS1R3Q7RTX0 852 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 APBB1IPQ7Z5R6 666 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 MFSD6LQ8IWD5 586 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 TMEM130Q8N3G9 435 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 SHKBP1Q8TBC3 707 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 KIFAP3Q92845 792 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 SUSD3Q96L08 255 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ZNF512Q96ME7 567 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ACO2Q99798 780 aaKnown RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 TARS2Q9BW92 718 aaKnown RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 BHMT2Q9H2M3 363 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 SLITRK6Q9H5Y7 841 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 TRPV4Q9HBA0 871 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 PTPRHQ9HD43 1115 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ASAH2Q9NR71 780 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 C2orf42Q9NWW7 574 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 AFF4Q9UHB7 1163 aaKnown RBP9.95□□□□□ -0.82
SYNE2-209ENST00000553308 YIPF1Q9Y548 306 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 PHLPP2Q6ZVD8 1323 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 F5P12259 2224 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 ACACBO00763 2458 aa9.95□□□□□ -0.82
SYNE2-209ENST00000553308 CCDC169A6NNP5 214 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 ABLIM1O14639 778 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 VNN2O95498 520 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
SYNE2-209ENST00000553308 CPB1P15086 417 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 KCNE1P15382 129 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 NPTX2P47972 431 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 PEX3P56589 373 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 GUCY1B3Q02153 619 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 TRIM29Q14134 588 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 ZNF174Q15697 407 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 STXBP5Q5T5C0 1151 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 TXNDC11Q6PKC3 985 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 GPIHBP1Q8IV16 184 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 SPEM1Q8N4L4 309 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 LEMD2Q8NC56 503 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 CSGALNACT1Q8TDX6 532 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 DDX12PQ92771 950 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 CHAMP1Q96JM3 812 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 CNTN3Q9P232 1028 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 TUBGCP4Q9UGJ1 667 aa9.94□□□□□ -0.82
SYNE2-209ENST00000553308 A0A1W2PRU2 124 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 PAPSS2O95340 614 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-209ENST00000553308 OR4Q2P0C623 313 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 MCF2P10911 925 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 PROZP22891 400 aa9.93□□□□□ -0.82
SYNE2-209ENST00000553308 CTHP32929 405 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms