RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 ASB7Q9H672 318 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 FBXW11Q9UKB1 542 aa20.39■□□□□ 0.85
HDAC4-217ENST00000553145 CCDC195A0A1B0GUA6 201 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 PVALEFA0A1B0GWK0 134 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 GOLGA8IPA6NC78 632 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 GOLGA8JA6NMD2 632 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 EIF3DO15371 548 aaKnown RBP eCLIP20.38■□□□□ 0.85
HDAC4-217ENST00000553145 XPOTO43592 962 aaKnown RBP20.38■□□□□ 0.85
HDAC4-217ENST00000553145 OR1D2P34982 312 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 NUCB2P80303 420 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 TMEM132DQ14C87 1099 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 ATAT1Q5SQI0 421 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 VARS2Q5ST30 1063 aaKnown RBP20.38■□□□□ 0.85
HDAC4-217ENST00000553145 ARMCX5Q6P1M9 558 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 ANKS3Q6ZW76 656 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 STXBP4Q6ZWJ1 553 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 RNF135Q8IUD6 432 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 FSIP1Q8NA03 581 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 KREMEN2Q8NCW0 462 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 BEST2Q8NFU1 509 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 CMASQ8NFW8 434 aaPredicted RBP20.38■□□□□ 0.85
HDAC4-217ENST00000553145 ZNF507Q8TCN5 953 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 HDAC7Q8WUI4 952 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 ZNF707Q96C28 371 aaPredicted RBP20.38■□□□□ 0.85
HDAC4-217ENST00000553145 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 DERAQ9Y315 318 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 BACE2Q9Y5Z0 518 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 CDY1Q9Y6F8 540 aa20.38■□□□□ 0.85
HDAC4-217ENST00000553145 MTCL1Q9Y4B5 1905 aaKnown RBP20.37■□□□□ 0.85
HDAC4-217ENST00000553145 A0A1W2PQ27 194 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 A0A1W2PQ64 194 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 A0A1W2PQD8 194 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 PI4K2BG5E9Z4 385 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 SYN3O14994 580 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 SYKP43405 635 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 POU5F1Q01860 360 aaKnown RBP20.37■□□□□ 0.85
HDAC4-217ENST00000553145 RAB33AQ14088 237 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 MRPL58Q14197 206 aaKnown RBP20.37■□□□□ 0.85
HDAC4-217ENST00000553145 C15orf39Q6ZRI6 1047 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 BRSK2Q8IWQ3 736 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 SCFD1Q8WVM8 642 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 SLC39A2Q9NP94 309 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 TSHZ2Q9NRE2 1034 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 DPP7Q9UHL4 492 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 USP25Q9UHP3 1055 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 C2CD2Q9Y426 696 aa20.37■□□□□ 0.85
HDAC4-217ENST00000553145 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.37■□□□□ 0.85
HDAC4-217ENST00000553145 M0QZQ0 153 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 TGFB1I1O43294 461 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 TBC1D4O60343 1298 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 PAPLNO95428 1278 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 PRR29P0C7W0 189 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 AARSP49588 968 aaKnown RBP eCLIP20.36■□□□□ 0.85
HDAC4-217ENST00000553145 C9orf57Q5W0N0 161 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 NELFCDQ8IXH7 590 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 FAM84AQ96KN4 292 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 RBAKQ9NYW8 714 aaPredicted RBP20.36■□□□□ 0.85
HDAC4-217ENST00000553145 MUTYHQ9UIF7 546 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 PCDHB8Q9UN66 801 aa20.36■□□□□ 0.85
HDAC4-217ENST00000553145 UBE4BO95155 1302 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 ANO9A1A5B4 782 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 C2CD4DB7Z1M9 353 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 SPTLC1O15269 473 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 EXTL3O43909 919 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 ZMYND10O75800 440 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 IL18RAPO95256 599 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 LDHAP00338 332 aaKnown RBP20.35■□□□□ 0.85
HDAC4-217ENST00000553145 SLC8B1Q6J4K2 584 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 ELMSAN1Q6PJG2 1045 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 NOC3LQ8WTT2 800 aaKnown RBP20.35■□□□□ 0.85
HDAC4-217ENST00000553145 ZDHHC7Q9NXF8 308 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 FBXL5Q9UKA1 691 aa20.35■□□□□ 0.85
HDAC4-217ENST00000553145 TIMM13Q9Y5L4 95 aaPredicted RBP20.35■□□□□ 0.85
HDAC4-217ENST00000553145 PIRO00625 290 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 DCXO43602 365 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 ROR1Q01973 937 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 BMT2Q1RMZ1 405 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 KMT5BQ4FZB7 885 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 GPD1LQ8N335 351 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 KIAA0895Q8NCT3 520 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 SMG7Q92540 1137 aaKnown RBP20.34■□□□□ 0.85
HDAC4-217ENST00000553145 RHOBTB2Q9BYZ6 727 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 C11orf16Q9NQ32 467 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 AGPAT3Q9NRZ7 376 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 DPP3Q9NY33 737 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 HSPBP1Q9NZL4 362 aa20.34■□□□□ 0.85
HDAC4-217ENST00000553145 TSC2P49815 1807 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 WDR27A2RRH5 827 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 C8AP07357 584 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 LILRA4P59901 499 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 STK4Q13043 487 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 CTXN3Q4LDR2 81 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 LIN9Q5TKA1 542 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 SCARA3Q6AZY7 606 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 DSTYKQ6XUX3 929 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 KRBA2Q6ZNG9 492 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 CCDC149Q6ZUS6 474 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 CBWD2Q8IUF1 395 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 APPL2Q8NEU8 664 aa20.33■□□□□ 0.85
HDAC4-217ENST00000553145 PRKD2Q9BZL6 878 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms