RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 B8ZZF3 427 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 TRDMT1O14717 391 aaKnown RBP12.53□□□□□ -0.4
GPN3-208ENST00000550974 DDAH1O94760 285 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 ABLIM3O94929 683 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 STBD1O95210 358 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 CALM1P0DP23 149 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 CALM2P0DP24 149 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 CALM3P0DP25 149 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 ATF2P15336 505 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 RXRAP19793 462 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 SDSP20132 328 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
GPN3-208ENST00000550974 TKTP29401 623 aaKnown RBP12.53□□□□□ -0.4
GPN3-208ENST00000550974 AXLP30530 894 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 ADCY7P51828 1080 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 PRR16Q569H4 304 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 COLEC12Q5KU26 742 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 TICAM2Q86XR7 235 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 NAXDQ8IW45 347 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 TCEAL8Q8IYN2 117 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 SPRYD3Q8NCJ5 442 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 BPIFB1Q8TDL5 484 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 PRPF31Q8WWY3 499 aaKnown RBP12.53□□□□□ -0.4
GPN3-208ENST00000550974 RLN3Q8WXF3 142 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 ACDQ96AP0 544 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 CCDC51Q96ER9 411 aa12.53□□□□□ -0.4
GPN3-208ENST00000550974 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
GPN3-208ENST00000550974 I3L4J1 428 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 SLC28A2O43868 658 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 DRD1P21728 446 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 ITPKAP23677 461 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.41
GPN3-208ENST00000550974 GALK1P51570 392 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 EPHA5P54756 1037 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 LAMTOR4Q0VGL1 99 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 LYSMD4Q5XG99 296 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 WWC2Q6AWC2 1192 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
GPN3-208ENST00000550974 RNF149Q8NC42 400 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.41
GPN3-208ENST00000550974 CHFRQ96EP1 664 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 JPH2Q9BR39 696 aaPredicted RBP12.52□□□□□ -0.41
GPN3-208ENST00000550974 DNAAF2Q9NVR5 837 aaKnown RBP12.52□□□□□ -0.41
GPN3-208ENST00000550974 PILRBQ9UKJ0 227 aa12.52□□□□□ -0.41
GPN3-208ENST00000550974 USP9XQ93008 2570 aaPredicted RBP12.52□□□□□ -0.41
GPN3-208ENST00000550974 FAM149AA5PLN7 773 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 KRT38O76015 456 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 B3GAT3O94766 335 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 NPTXRO95502 500 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 CYP3A4P08684 503 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 SERPINF2P08697 491 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
GPN3-208ENST00000550974 DPP6P42658 865 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 PDE1AP54750 535 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 FBXO43Q4G163 708 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 PLA2G4FQ68DD2 849 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 RALYLQ86SE5 291 aaKnown RBP12.51□□□□□ -0.41
GPN3-208ENST00000550974 RASSF3Q86WH2 238 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 MDGA1Q8NFP4 955 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 CEP76Q8TAP6 659 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 SPATA18Q8TC71 538 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
GPN3-208ENST00000550974 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 UNC45AQ9H3U1 944 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 GKN1Q9NS71 199 aa12.51□□□□□ -0.41
GPN3-208ENST00000550974 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
GPN3-208ENST00000550974 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
GPN3-208ENST00000550974 KIAA1522Q9P206 1035 aaPredicted RBP12.51□□□□□ -0.41
GPN3-208ENST00000550974 OTOL1A6NHN0 477 aaPredicted RBP12.5□□□□□ -0.41
GPN3-208ENST00000550974 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 THP07101 528 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 SFNP31947 248 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
GPN3-208ENST00000550974 CSRP3P50461 194 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 JAK3P52333 1124 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 SLC14A1Q13336 389 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 CAMK2BQ13554 666 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 RUNX3Q13761 415 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 NAIF1Q69YI7 327 aaPredicted RBP12.5□□□□□ -0.41
GPN3-208ENST00000550974 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
GPN3-208ENST00000550974 IGDCC4Q8TDY8 1250 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 KIF2CQ99661 725 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 EBF3Q9H4W6 596 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 OBP2AQ9NY56 170 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
GPN3-208ENST00000550974 TPCN1Q9ULQ1 816 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 KIF26AQ9ULI4 1882 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms