RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 EPAS1Q99814 870 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 INTS13Q9NVM9 706 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 TJP2Q9UDY2 1190 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.38□□□□□ -0.43
VDR-206ENST00000549336 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
VDR-206ENST00000549336 V9GYY5 206 aaPredicted RBP12.38□□□□□ -0.43
VDR-206ENST00000549336 NRAPQ86VF7 1730 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 ECEL1O95672 775 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 WEE2P0C1S8 567 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 CLK2P49760 499 aaKnown RBP12.38□□□□□ -0.43
VDR-206ENST00000549336 GTF2BQ00403 316 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
VDR-206ENST00000549336 E2F4Q16254 413 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 PAN2Q504Q3 1202 aaKnown RBP12.38□□□□□ -0.43
VDR-206ENST00000549336 TMC7Q7Z402 723 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 CDKL2Q92772 493 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 ZWILCHQ9H900 591 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 PLCB1Q9NQ66 1216 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 VAV3Q9UKW4 847 aa12.38□□□□□ -0.43
VDR-206ENST00000549336 CCDC66A2RUB6 948 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 CCDC188H7C350 402 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
VDR-206ENST00000549336 STAMBPO95630 424 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 FTCDO95954 541 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 CXCL8P10145 99 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 LCP1P13796 627 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 SERPINB6P35237 376 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 SOX10P56693 466 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 CTU1Q7Z7A3 348 aaKnown RBP12.37□□□□□ -0.43
VDR-206ENST00000549336 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.37□□□□□ -0.43
VDR-206ENST00000549336 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 MAPK13O15264 365 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 ASGR1P07306 291 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 CTXN3Q4LDR2 81 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 UROC1Q96N76 676 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 SEMA6BQ9H3T3 888 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 FHOD1Q9Y613 1164 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 GFPT1Q06210 699 aaPredicted RBP12.37□□□□□ -0.43
VDR-206ENST00000549336 PSMD6Q15008 389 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
VDR-206ENST00000549336 HSPH1Q92598 858 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 WNT8AQ9H1J5 351 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 RNPEPQ9H4A4 650 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 VPS37BQ9H9H4 285 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
VDR-206ENST00000549336 GIPC1O14908 333 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 RAD51Q06609 339 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 GRB14Q14449 540 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 KCNA10Q16322 511 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 FIGNQ5HY92 759 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 TRIM65Q6PJ69 517 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 ADGRF2Q8IZF7 708 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 C17orf53Q8N3J3 647 aaPredicted RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 NIFKQ9BYG3 293 aaKnown RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 ANAPC5Q9UJX4 755 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 AKAP3O75969 853 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 VPS41P49754 854 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 EPHB1P54762 984 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 MICALCLQ6ZW33 695 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 ZNF518BQ9C0D4 1074 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.36□□□□□ -0.43
VDR-206ENST00000549336 TMEM51Q9NW97 253 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 TMEM150BA6NC51 233 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 CA4P22748 312 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 KCNK18Q7Z418 384 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 PAIP2Q9BPZ3 127 aaKnown RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 HIPK3Q9H422 1215 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 FAM49BQ9NUQ9 324 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 MSRAQ9UJ68 235 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 DYNLT1P63172 113 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 PIGHQ14442 188 aaPredicted RBP12.36□□□□□ -0.43
VDR-206ENST00000549336 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 ZNF449Q6P9G9 518 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 ASAP3Q8TDY4 903 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 APBB2Q92870 758 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 COL20A1Q9P218 1284 aa12.36□□□□□ -0.43
VDR-206ENST00000549336 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 SMIM23A6NLE4 172 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 EFCAB8A8MWE9 144 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 SPATA31C1P0DKV0 1188 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 SLC2A3P11169 496 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 SELPP16109 830 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 ANO5Q75V66 913 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 TRIM59Q8IWR1 403 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 ABI2Q9NYB9 513 aaPredicted RBP12.35□□□□□ -0.43
VDR-206ENST00000549336 PCDHA2Q9Y5H9 948 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 HEXIM1O94992 359 aaKnown RBP12.35□□□□□ -0.43
VDR-206ENST00000549336 SMPD1P17405 629 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 CASP4P49662 377 aa12.35□□□□□ -0.43
VDR-206ENST00000549336 YWHAHQ04917 246 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms