RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CCNE1P24864 410 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 EFNA5P52803 228 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 SOX4Q06945 474 aaPredicted RBP14.87□□□□□ -0.03
CDX2-202ENST00000548877 DMWDQ09019 674 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 FCHO2Q0JRZ9 810 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 STK3Q13188 491 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 NR5A1Q13285 461 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 PPP2R5AQ15172 486 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 GLRA4Q5JXX5 417 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 NT5DC1Q5TFE4 455 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 MAEAQ7L5Y9 396 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 CATSPER3Q86XQ3 398 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 NACC1Q96RE7 527 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 LARP6Q9BRS8 491 aaKnown RBP14.87□□□□□ -0.03
CDX2-202ENST00000548877 C8orf33Q9H7E9 229 aaPredicted RBP14.87□□□□□ -0.03
CDX2-202ENST00000548877 CYP4F11Q9HBI6 524 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 NCANO14594 1321 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 CITO14578 2027 aa14.87□□□□□ -0.03
CDX2-202ENST00000548877 CHADO15335 359 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 NEMFO60524 1076 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 RPL9P32969 192 aaKnown RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 KRT2P35908 639 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 VIPR2P41587 438 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 GRM5P41594 1212 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 TXKP42681 527 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 TMEM132AQ24JP5 1023 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 WDR44Q5JSH3 913 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 DGKKQ5KSL6 1271 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 APBB1IPQ7Z5R6 666 aaPredicted RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 WDR5BQ86VZ2 330 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 ELMOD1Q8N336 334 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 FAM160A2Q8N612 972 aaPredicted RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 BEST2Q8NFU1 509 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 ZSCAN18Q8TBC5 510 aaPredicted RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 LOXL4Q96JB6 756 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 ZNF512Q96ME7 567 aaPredicted RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 POLR3CQ9BUI4 534 aaPredicted RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 GOLGA2P5Q9HBQ8 144 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 SLC38A7Q9NVC3 462 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 CEP72Q9P209 647 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 AFF4Q9UHB7 1163 aaKnown RBP14.86□□□□□ -0.03
CDX2-202ENST00000548877 FBXL5Q9UKA1 691 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 TNFSF13BQ9Y275 285 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 USP20Q9Y2K6 914 aa14.86□□□□□ -0.03
CDX2-202ENST00000548877 MYBPHLA2RUH7 354 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 HEPACAM2A8MVW5 462 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 PFKFB2O60825 505 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 KCNE1P15382 129 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 SRSF5Q13243 272 aaKnown RBP14.85□□□□□ -0.03
CDX2-202ENST00000548877 N4BP2L1Q5TBK1 243 aaPredicted RBP14.85□□□□□ -0.03
CDX2-202ENST00000548877 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 PADI6Q6TGC4 694 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 HS6ST3Q8IZP7 471 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 SYNPOQ8N3V7 929 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 DEPTORQ8TB45 409 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 WASF1Q92558 559 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 SUSD3Q96L08 255 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 LRRC3Q9BY71 257 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 PTPRHQ9HD43 1115 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 TOPORSQ9NS56 1045 aaPredicted RBP14.85□□□□□ -0.03
CDX2-202ENST00000548877 FRYQ5TBA9 3013 aa14.85□□□□□ -0.03
CDX2-202ENST00000548877 BAHCC1Q9P281 2608 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 SDK1Q7Z5N4 2213 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 CCDC163A0A0D9SF12 145 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 PODXLO00592 558 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 WNT7AO00755 349 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 MED24O75448 989 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 CTDNEP1O95476 244 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 ZNF806P0C7X5 589 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 MUTP22033 750 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 RPA1P27694 616 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 IL31Q6EBC2 164 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 RALGPS2Q86X27 583 aaPredicted RBP14.84□□□□□ -0.03
CDX2-202ENST00000548877 SHKBP1Q8TBC3 707 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 CSGALNACT1Q8TDX6 532 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 RSPRY1Q96DX4 576 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 ZMAT2Q96NC0 199 aaKnown RBP14.84□□□□□ -0.03
CDX2-202ENST00000548877 BRMS1Q9HCU9 246 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 ASAH2Q9NR71 780 aa14.84□□□□□ -0.03
CDX2-202ENST00000548877 NUP210Q8TEM1 1887 aaPredicted RBP14.84□□□□□ -0.03
CDX2-202ENST00000548877 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
CDX2-202ENST00000548877 CTHP32929 405 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 RAP1GAPP47736 663 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 YARSP54577 528 aaKnown RBP14.83□□□□□ -0.04
CDX2-202ENST00000548877 TWF1Q12792 350 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 CCINQ13939 588 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 TEAD2Q15562 447 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 CTXN3Q4LDR2 81 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 ZNF280DQ6N043 979 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 CCDC94Q9BW85 323 aaPredicted RBP14.83□□□□□ -0.04
CDX2-202ENST00000548877 TMEM60Q9H2L4 133 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 RBM12Q9NTZ6 932 aaKnown RBP14.83□□□□□ -0.04
CDX2-202ENST00000548877 PDRG1Q9NUG6 133 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 OBP2AQ9NY56 170 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 CNTN3Q9P232 1028 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
CDX2-202ENST00000548877 LAMA1P25391 3075 aa14.83□□□□□ -0.04
CDX2-202ENST00000548877 SPECC1L-ADORA2AF8WAN1 911 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms