RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 LONP1P36776 959 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 LIG4P49917 911 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 ARPP19P56211 112 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 GPC5P78333 572 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 SF3A1Q15459 793 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 CTXN3Q4LDR2 81 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 TCEAL8Q8IYN2 117 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 RAD54LQ92698 747 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 DDX12PQ92771 950 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 FIZ1Q96SL8 496 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 KXD1Q9BQD3 176 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 PLEKHA5Q9HAU0 1116 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 PARVGQ9HBI0 331 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 DLGAP2Q9P1A6 1054 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 TBX20Q9UMR3 447 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 PCDHB8Q9UN66 801 aa18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 MRPS23Q9Y3D9 190 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-205ENST00000548650 PTPRZ1P23471 2315 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 STK25O00506 426 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 PRRG1O14668 218 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 FAM13AO94988 1023 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 LRG1P02750 347 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 CEBPBP17676 345 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 SCP2P22307 547 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 MATR3P43243 847 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 AARSP49588 968 aaKnown RBP eCLIP18.95■□□□□ 0.621e-6■■■■□ 20.6
CHMP1A-205ENST00000548650 PPP2R3AQ06190 1150 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 CUL4AQ13619 759 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 DHX8Q14562 1220 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 MCM6Q14566 821 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 ZBTB6Q15916 424 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 PRSS36Q5K4E3 855 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 TPGS2Q68CL5 300 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 SLC39A4Q6P5W5 647 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 POTEHQ6S545 545 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 KIF12Q96FN5 646 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 CYP4F11Q9HBI6 524 aa18.95■□□□□ 0.62
CHMP1A-205ENST00000548650 M0QZQ0 153 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 CYP3A5P20815 502 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 ELF1P32519 619 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 GUCY2FP51841 1108 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 STARD6P59095 220 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 ENOX2Q16206 610 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 MYCT1Q8N699 235 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 APPL2Q8NEU8 664 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 PJA1Q8NG27 643 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 LARP4BQ92615 738 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 FOXQ1Q9C009 403 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 GDE1Q9NZC3 331 aa18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 UBQLN1Q9UMX0 589 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-205ENST00000548650 CACNA1IQ9P0X4 2223 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 VPS37CA5D8V6 355 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 LACTBL1A8MY62 500 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 NRG2O14511 850 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 OGTO15294 1046 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 TRAK2O60296 914 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 TBCAO75347 108 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 ADRB2P07550 413 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 DCNP07585 359 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 KYAT1Q16773 422 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 SPECC1Q5M775 1068 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 MAP4K3Q8IVH8 894 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 RASSF8Q8NHQ8 419 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 CORO1BQ9BR76 489 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 DDX23Q9BUQ8 820 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 AFF4Q9UHB7 1163 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 SCN1AP35498 2009 aa18.93■□□□□ 0.62
CHMP1A-205ENST00000548650 SPTBN4Q9H254 2564 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 A0A0B4J269 797 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 PPEF2O14830 753 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 ECI2O75521 394 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 KRT18P05783 430 aaKnown RBP18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 CPB1P15086 417 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 GLULP15104 373 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 PTPN2P17706 415 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 FCARP24071 287 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 CCR2P41597 374 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 ADCY1Q08828 1119 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 PTPAQ15257 358 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 MLF2Q15773 248 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 BEST2Q8NFU1 509 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 NKD2Q969F2 451 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 TCEAL4Q96EI5 215 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 MCRS1Q96EZ8 462 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 CCSER1Q9C0I3 900 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 SIT1Q9Y3P8 196 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 TCHHQ07283 1943 aa18.92■□□□□ 0.62
CHMP1A-205ENST00000548650 LRRN2O75325 713 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 OAZ2O95190 189 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 VNN2O95498 520 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 NMT1P30419 496 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 GTF2BQ00403 316 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 PRKCQQ04759 706 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 YWHAHQ04917 246 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 SNW1Q13573 536 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 RNF19BQ6ZMZ0 732 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 USP49Q70CQ1 688 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 SHDQ96IW2 340 aa18.91■□□□□ 0.62
CHMP1A-205ENST00000548650 MSTO1Q9BUK6 570 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms