RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 FOXD4Q12950 439 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-210ENST00000547654 ODF1Q14990 250 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 LONRF1Q17RB8 773 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 ALFQ53S48 1182 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 DOK3Q7L591 496 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 SRGAP1Q7Z6B7 1085 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 MIER2Q8N344 545 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 LCORLQ8N3X6 602 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 TEX19Q8NA77 164 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 OR5M3Q8NGP4 307 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 OR14C36Q8NHC7 312 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 EAF2Q96CJ1 260 aaPredicted RBP5.19□□□□□ -1.58
SCAF11-210ENST00000547654 TEKT5Q96M29 485 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 MYD88Q99836 296 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 ZHX3Q9H4I2 956 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 SERHL2Q9H4I8 314 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 SYNPO2LQ9H987 977 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 TRPM5Q9NZQ8 1165 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 ANKFY1Q9P2R3 1169 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 GTF2A1LQ9UNN4 478 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 NOC2LQ9Y3T9 749 aaKnown RBP5.19□□□□□ -1.58
SCAF11-210ENST00000547654 SPATA31A6Q5VVP1 1343 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 ATRNL1Q5VV63 1379 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 F5H423 210 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 LPXNO60711 386 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 NBNO60934 754 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 LPLP06858 475 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 LTA4HP09960 611 aaKnown RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 SETSIPP0DME0 302 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 CDK4P11802 303 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 RHCEP18577 417 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 ENPP1P22413 925 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 AKAP5P24588 427 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 CTSSP25774 331 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 APOBEC3AP31941 199 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 ZEB1P37275 1124 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 CASRP41180 1078 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 HALP42357 657 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 GPR3P46089 330 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 MEF2AQ02078 507 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 RHDQ02161 417 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 BIRC3Q13489 604 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 CCDC62Q6P9F0 684 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 PCGF5Q86SE9 256 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 FAM83AQ86UY5 434 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 MYLK4Q86YV6 388 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 SYT12Q8IV01 421 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 SLC35G2Q8TBE7 412 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 FERMT2Q96AC1 680 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 TAAR9Q96RI9 348 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 SELENOOQ9BVL4 669 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 WDR11Q9BZH6 1224 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 CCM2LQ9NUG4 571 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-210ENST00000547654 LUZP4Q9P127 313 aa5.18□□□□□ -1.58
SCAF11-210ENST00000547654 AHRRA9YTQ3 701 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 RNASET2O00584 256 aaKnown RBP5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA12O60330 932 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 LGALS4P56470 323 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PPARAQ07869 468 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PPP3CAQ08209 521 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 MGAT5Q09328 741 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 GALEQ14376 348 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 KRT72Q14CN4 511 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 MAPRE1Q15691 268 aaKnown RBP5.17□□□□□ -1.58
SCAF11-210ENST00000547654 ERCC6LQ2NKX8 1250 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 XRRA1Q6P2D8 792 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 CCDC149Q6ZUS6 474 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 Q6ZVL8 140 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 SNX33Q8WV41 574 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 CAVIN3Q969G5 261 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 NDC1Q9BTX1 674 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 RSAD1Q9HA92 442 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 CHST2Q9Y4C5 530 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA9Q9Y5G4 932 aaKnown RBP5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA8Q9Y5G5 932 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA7Q9Y5G6 932 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA6Q9Y5G7 932 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA3Q9Y5H0 932 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 PCDHGA2Q9Y5H1 932 aa5.17□□□□□ -1.58
SCAF11-210ENST00000547654 MORC2Q9Y6X9 1032 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-210ENST00000547654 ZMYM3Q14202 1370 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 TPP1O14773 563 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 DTNBO60941 627 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 NCR1O76036 304 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 ZRANB2O95218 330 aaKnown RBP eCLIP5.16□□□□□ -1.58
SCAF11-210ENST00000547654 ZBED1O96006 694 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 BDNFP23560 247 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 MAN1A1P33908 653 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 CLK3P49761 638 aaKnown RBP5.16□□□□□ -1.58
SCAF11-210ENST00000547654 FAM189BP81408 668 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 ZNF267Q14586 743 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-210ENST00000547654 COLEC12Q5KU26 742 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 CHST15Q7LFX5 561 aaPredicted RBP5.16□□□□□ -1.58
SCAF11-210ENST00000547654 GDF7Q7Z4P5 450 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 GLCCI1Q86VQ1 547 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 CAMKK1Q8N5S9 505 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 SSH1Q8WYL5 1049 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 TRIM63Q969Q1 353 aa5.16□□□□□ -1.58
SCAF11-210ENST00000547654 ACAP3Q96P50 834 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms