RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 CTXN1P60606 82 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 SLFN5Q08AF3 891 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 RSPH3Q86UC2 560 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 SSH3Q8TE77 659 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 PDLIM2Q96JY6 352 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 FAM126AQ9BYI3 521 aaPredicted RBP4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 SEMA4GQ9NTN9 838 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 SAP30BPQ9UHR5 308 aaKnown RBP4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 PRKAB1Q9Y478 270 aa4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 COL11A2P13942 1736 aaPredicted RBP4.41□□□□□ -1.7
RAB3IP-209ENST00000547055 TRIM75PA6NK02 468 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 SP5Q6BEB4 398 aaPredicted RBP4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 PGM2L1Q6PCE3 622 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 MIGA2Q7L4E1 593 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 CNTD1Q8N815 330 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 DCBLD1Q8N8Z6 715 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 ZNF384Q8TF68 577 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 SSH1Q8WYL5 1049 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 RAB24Q969Q5 203 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 TMX3Q96JJ7 454 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 HEPHQ9BQS7 1158 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 TDP1Q9NUW8 608 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 SLC17A6Q9P2U8 582 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.71
RAB3IP-209ENST00000547055 NDUFS2O75306 463 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 AGFG2O95081 481 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 MATN4O95460 622 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 MTHFD1P11586 935 aaKnown RBP4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 SLC6A4P31645 630 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 FOLR3P41439 243 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 WASP42768 502 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 TARDBPQ13148 414 aaKnown RBP eCLIP4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 SF3B3Q15393 1217 aaKnown RBP4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 UTP14CQ5TAP6 766 aaKnown RBP4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 Q8NA96 180 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 HDAC10Q969S8 669 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 TMEM125Q96AQ2 219 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 TLR10Q9BXR5 811 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 KLK15Q9H2R5 256 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 TMX1Q9H3N1 280 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 MKS1Q9NXB0 559 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 MCM8Q9UJA3 840 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 PCDHA13Q9Y5I0 950 aa4.39□□□□□ -1.71
RAB3IP-209ENST00000547055 A0A1W2PS29 197 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 LRRC3CA6NJW4 275 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 GRM6O15303 877 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 YY2O15391 372 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 SBK3P0C264 359 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 CDK4P11802 303 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 POU3F3P20264 500 aaPredicted RBP4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 SLC16A1P53985 500 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 CDC42EP1Q00587 391 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 FPGSQ05932 587 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 ACAP2Q15057 778 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 PABPC1LQ4VXU2 614 aaKnown RBP4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 AKNAD1Q5T1N1 836 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 CLNKQ7Z7G1 428 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 PUS7LQ9H0K6 701 aaKnown RBP4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 IL17RBQ9NRM6 502 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 INTS13Q9NVM9 706 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 ASB6Q9NWX5 421 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 SLC5A4Q9NY91 659 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 CDYLQ9Y232 598 aa4.38□□□□□ -1.71
RAB3IP-209ENST00000547055 PRAMEF33A0A0G2JMD5 474 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 ORC4O43929 436 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 PRAMEF10O60809 474 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 C1QL1O75973 258 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 KCNA2P16389 499 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 IARSP41252 1262 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 RPS7P62081 194 aaKnown RBP4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 NHLH1Q02575 133 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 ZNF844Q08AG5 666 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 KAZNQ674X7 775 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 VWA1Q6PCB0 445 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 DDX42Q86XP3 938 aaKnown RBP eCLIP4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 C1orf162Q8NEQ5 155 aaPredicted RBP4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 JADE3Q92613 823 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 FBXL20Q96IG2 436 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 PACSIN1Q9BY11 444 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 TUBD1Q9UJT1 453 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 FRMD4BQ9Y2L6 1034 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 NEU2Q9Y3R4 380 aa4.37□□□□□ -1.71
RAB3IP-209ENST00000547055 CCDC151A5D8V7 595 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 MPPED1O15442 326 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 SGTAO43765 313 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 MT-CO1P00395 513 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 SRGNP10124 158 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 GATA3P23771 443 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 RGS19P49795 217 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 ZNF280AP59817 542 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 INAVAQ3KP66 663 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 CD300EQ496F6 205 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 PREPLQ4J6C6 727 aaPredicted RBP4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 EGFLAMQ63HQ2 1017 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 KIAA0895LQ68EN5 471 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 TSHZ1Q6ZSZ6 1077 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 NECAB2Q7Z6G3 386 aa4.36□□□□□ -1.71
RAB3IP-209ENST00000547055 GRASPQ7Z6J2 395 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms