RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 VPS36Q86VN1 386 aa32.68■■■□□ 2.82
CCM2-219ENST00000544363 TMEM130Q8N3G9 435 aa32.68■■■□□ 2.82
CCM2-219ENST00000544363 BEST2Q8NFU1 509 aa32.68■■■□□ 2.82
CCM2-219ENST00000544363 NIF3L1Q9GZT8 377 aa32.68■■■□□ 2.82
CCM2-219ENST00000544363 SMIM28A0A1B0GU29 152 aa32.67■■■□□ 2.82
CCM2-219ENST00000544363 POLR2BP30876 1174 aaKnown RBP32.67■■■□□ 2.82
CCM2-219ENST00000544363 RAB27AP51159 221 aa32.67■■■□□ 2.82
CCM2-219ENST00000544363 ATN1P54259 1190 aaPredicted RBP32.67■■■□□ 2.82
CCM2-219ENST00000544363 RBP5P82980 135 aa32.67■■■□□ 2.82
CCM2-219ENST00000544363 MRPL10Q7Z7H8 261 aaKnown RBP32.67■■■□□ 2.82
CCM2-219ENST00000544363 C16orf45Q96MC5 204 aaPredicted RBP32.67■■■□□ 2.82
CCM2-219ENST00000544363 SYT11Q9BT88 431 aa32.67■■■□□ 2.82
CCM2-219ENST00000544363 AGAP1Q9UPQ3 857 aa32.67■■■□□ 2.82
CCM2-219ENST00000544363 R3HCC1Q9Y3T6 440 aaKnown RBP32.67■■■□□ 2.82
CCM2-219ENST00000544363 A0A087X0T9 212 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 A0A0U1RQJ8 604 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 CYP26A1O43174 497 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 PQBP1O60828 265 aaKnown RBP32.66■■■□□ 2.82
CCM2-219ENST00000544363 FAM228BP0C875 321 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 ITGA4P13612 1032 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 ACO1P21399 889 aaKnown RBP32.66■■■□□ 2.82
CCM2-219ENST00000544363 GJA8P48165 433 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 PTPN14Q15678 1187 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 GLRA4Q5JXX5 417 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 ANKRD33Q7Z3H0 272 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 ATRIPQ8WXE1 791 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 ADAM2Q99965 735 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 VRTNQ9H8Y1 702 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 UBQLN1Q9UMX0 589 aaKnown RBP32.66■■■□□ 2.82
CCM2-219ENST00000544363 ZNF623O75123 536 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 KRT5P13647 590 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 BMS1Q14692 1282 aaKnown RBP32.66■■■□□ 2.82
CCM2-219ENST00000544363 KIAA1328Q86T90 577 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 FAXDC2Q96IV6 333 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 PCDHA13Q9Y5I0 950 aa32.66■■■□□ 2.82
CCM2-219ENST00000544363 PDCD11Q14690 1871 aaKnown RBP32.65■■■□□ 2.82
CCM2-219ENST00000544363 PITPNM1O00562 1244 aa32.65■■■□□ 2.82
CCM2-219ENST00000544363 COL6A1P12109 1028 aa32.65■■■□□ 2.82
CCM2-219ENST00000544363 ZNF667Q5HYK9 610 aa32.65■■■□□ 2.82
CCM2-219ENST00000544363 IFIH1Q9BYX4 1025 aaKnown RBP32.65■■■□□ 2.82
CCM2-219ENST00000544363 TUBGCP4Q9UGJ1 667 aa32.65■■■□□ 2.82
CCM2-219ENST00000544363 A0A0U1RQF3 1178 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 XPOTO43592 962 aaKnown RBP32.64■■■□□ 2.82
CCM2-219ENST00000544363 STAU1O95793 577 aaKnown RBP32.64■■■□□ 2.82
CCM2-219ENST00000544363 VAV2P52735 878 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 ZNF662Q6ZS27 426 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 UBR7Q8N806 425 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 ANKLE1Q8NAG6 615 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 C18orf25Q96B23 403 aaPredicted RBP32.64■■■□□ 2.82
CCM2-219ENST00000544363 LZTFL1Q9NQ48 299 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 CNTN6Q9UQ52 1028 aa32.64■■■□□ 2.82
CCM2-219ENST00000544363 MAGEA1P43355 309 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 C1orf53Q5VUE5 145 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 SMYD5Q6GMV2 418 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 OLIG1Q8TAK6 271 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 HPDLQ96IR7 371 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 AGPAT1Q99943 283 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 RNF19AQ9NV58 838 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 GIT1Q9Y2X7 761 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 PCDHB4Q9Y5E5 795 aa32.63■■■□□ 2.81
CCM2-219ENST00000544363 DDX3XO00571 662 aaKnown RBP eCLIP32.62■■■□□ 2.811e-10■■■□□ 15
CCM2-219ENST00000544363 SKIP12755 728 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 ARHGAP25P42331 645 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 ASPAP45381 313 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 WDR72Q3MJ13 1102 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 ARHGAP29Q52LW3 1261 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 SLC47A2Q86VL8 602 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 SLC30A5Q8TAD4 765 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 EPS8L1Q8TE68 723 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 DIS3LQ8TF46 1054 aaKnown RBP32.62■■■□□ 2.81
CCM2-219ENST00000544363 TOX2Q96NM4 488 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 NXF1Q9UBU9 619 aaKnown RBP32.62■■■□□ 2.81
CCM2-219ENST00000544363 MEIS3P2A8K0S8 358 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 CYP3A5P20815 502 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 TNFAIP3P21580 790 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 LNX1Q8TBB1 728 aaPredicted RBP32.62■■■□□ 2.81
CCM2-219ENST00000544363 LUC7LQ9NQ29 371 aaKnown RBP32.62■■■□□ 2.81
CCM2-219ENST00000544363 NOCTQ9UK39 431 aaKnown RBP32.62■■■□□ 2.81
CCM2-219ENST00000544363 POLIQ9UNA4 740 aa32.62■■■□□ 2.81
CCM2-219ENST00000544363 DCDC2CA8MYV0 355 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 TNNT1P13805 278 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 CYP11B1P15538 503 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 C10orf76Q5T2E6 689 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 AGMOQ6ZNB7 445 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 NOP9Q86U38 636 aaKnown RBP32.61■■■□□ 2.81
CCM2-219ENST00000544363 SLC20A1Q8WUM9 679 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 LPPQ93052 612 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 BCO2Q9BYV7 579 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 RGS18Q9NS28 235 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 NAGPAQ9UK23 515 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 NENFQ9UMX5 172 aa32.61■■■□□ 2.81
CCM2-219ENST00000544363 RCCD1A6NED2 376 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 PTGESO14684 152 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 PDE6CP51160 858 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 BPIFB4P59827 614 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 TMEM270Q6UE05 265 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 GLYCTKQ8IVS8 523 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 ZFP42Q96MM3 310 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 ACP6Q9NPH0 428 aa32.6■■■□□ 2.81
CCM2-219ENST00000544363 KIF2AO00139 706 aaPredicted RBP32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms