RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TRIP12Q14669 1992 aaPredicted RBP10.01□□□□□ -0.81
GNE-206ENST00000543356 FKTNO75072 461 aa10□□□□□ -0.81
GNE-206ENST00000543356 CST3P01034 146 aaPredicted RBP10□□□□□ -0.81
GNE-206ENST00000543356 GZMAP12544 262 aa10□□□□□ -0.81
GNE-206ENST00000543356 KRT5P13647 590 aa10□□□□□ -0.81
GNE-206ENST00000543356 MYL6P60660 151 aa10□□□□□ -0.81
GNE-206ENST00000543356 KCNA10Q16322 511 aa10□□□□□ -0.81
GNE-206ENST00000543356 RSPH3Q86UC2 560 aa10□□□□□ -0.81
GNE-206ENST00000543356 SERINC5Q86VE9 423 aa10□□□□□ -0.81
GNE-206ENST00000543356 SLAIN1Q8ND83 568 aa10□□□□□ -0.81
GNE-206ENST00000543356 DDX1Q92499 740 aaKnown RBP10□□□□□ -0.81
GNE-206ENST00000543356 ELMO3Q96BJ8 720 aa10□□□□□ -0.81
GNE-206ENST00000543356 CELF4Q9BZC1 486 aaKnown RBP10□□□□□ -0.81
GNE-206ENST00000543356 XYLT2Q9H1B5 865 aa10□□□□□ -0.81
GNE-206ENST00000543356 ISCUQ9H1K1 167 aa10□□□□□ -0.81
GNE-206ENST00000543356 OGFRQ9NZT2 677 aa10□□□□□ -0.81
GNE-206ENST00000543356 TRPV2Q9Y5S1 764 aa10□□□□□ -0.81
GNE-206ENST00000543356 UMODL1Q5DID0 1318 aa10□□□□□ -0.81
GNE-206ENST00000543356 CABYRO75952 493 aa10□□□□□ -0.81
GNE-206ENST00000543356 ATP1A1P05023 1023 aaKnown RBP10□□□□□ -0.81
GNE-206ENST00000543356 ATICP31939 592 aa10□□□□□ -0.81
GNE-206ENST00000543356 ZNF132P52740 706 aa10□□□□□ -0.81
GNE-206ENST00000543356 GALCP54803 685 aa10□□□□□ -0.81
GNE-206ENST00000543356 FMO1Q01740 532 aa10□□□□□ -0.81
GNE-206ENST00000543356 PTPN11Q06124 597 aaPredicted RBP10□□□□□ -0.81
GNE-206ENST00000543356 TMEM132DQ14C87 1099 aa10□□□□□ -0.81
GNE-206ENST00000543356 ZNF699Q32M78 642 aa10□□□□□ -0.81
GNE-206ENST00000543356 RNF180Q86T96 592 aa10□□□□□ -0.81
GNE-206ENST00000543356 C1orf127Q8N9H9 656 aa10□□□□□ -0.81
GNE-206ENST00000543356 SNX27Q96L92 541 aa10□□□□□ -0.81
GNE-206ENST00000543356 VRTNQ9H8Y1 702 aa10□□□□□ -0.81
GNE-206ENST00000543356 SEPT11Q9NVA2 429 aaKnown RBP10□□□□□ -0.81
GNE-206ENST00000543356 PCDHB2Q9Y5E7 798 aa10□□□□□ -0.81
GNE-206ENST00000543356 CITO14578 2027 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 ANKRD62A6NC57 917 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 M0QZ92 97 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 RTN2O75298 545 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 STAU1O95793 577 aaKnown RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 TCEAL1Q15170 157 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 WHAMMP3Q1A5X7 153 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 CXorf38Q8TB03 319 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 CALR3Q96L12 384 aaKnown RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 PCDHB18PQ96TA0 734 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 EIF2AQ9BY44 585 aaKnown RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 SIX4Q9UIU6 781 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 ITGA11Q9UKX5 1188 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 PCDHB4Q9Y5E5 795 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 ERICH4A6NGS2 130 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 BUB1O43683 1085 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 MMEP08473 750 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 ASPAP45381 313 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 MGAT3Q09327 533 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 TERF2Q15554 542 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 SCARA3Q6AZY7 606 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 FAM43BQ6ZT52 329 aaPredicted RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 RBBP8NLQ8NC74 664 aaPredicted RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 TSPAN18Q96SJ8 248 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 TAS2R14Q9NYV8 317 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 TSKSQ9UJT2 592 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 PIN4Q9Y237 131 aaKnown RBP9.99□□□□□ -0.81
GNE-206ENST00000543356 CDY2AQ9Y6F7 541 aa9.99□□□□□ -0.81
GNE-206ENST00000543356 INHAP05111 366 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 PRLRP16471 622 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 YARSP54577 528 aaKnown RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 NAP1L1P55209 391 aaKnown RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 FAM47CQ5HY64 1035 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 UBXN11Q5T124 520 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 FAM228AQ86W67 206 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 CEP112Q8N8E3 955 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 MNS1Q8NEH6 495 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 ZNF296Q8WUU4 475 aaPredicted RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 TSEN34Q9BSV6 310 aaKnown RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 CARD6Q9BX69 1037 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 BCO2Q9BYV7 579 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 SENP6Q9GZR1 1112 aaPredicted RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 FAM124BQ9H5Z6 455 aaPredicted RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 ACP6Q9NPH0 428 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 SNTG2Q9NY99 539 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 CNTN3Q9P232 1028 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 SAR1BQ9Y6B6 198 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 GRIN2DO15399 1336 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 GRID2IPA4D2P6 1211 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 MOXD2PA6NHM9 499 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 TMCO5BA8MYB1 307 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 ENC1O14682 589 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 PALMO75781 387 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 ITGB3P05106 788 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 HADHBP55084 474 aaKnown RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 CLEC16AQ2KHT3 1053 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 ALKAL1Q6UXT8 129 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 TRIM72Q6ZMU5 477 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 TRIM6Q9C030 488 aaPredicted RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 SNX12Q9UMY4 172 aa9.98□□□□□ -0.81
GNE-206ENST00000543356 NOC2LQ9Y3T9 749 aaKnown RBP9.98□□□□□ -0.81
GNE-206ENST00000543356 TADA3O75528 432 aa9.97□□□□□ -0.81
GNE-206ENST00000543356 FTLP02792 175 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms