RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 PODXLO00592 558 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 ZC3H11AO75152 810 aaKnown RBP eCLIP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 AFPP02771 609 aaKnown RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 ITGB3P05106 788 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 KRT13P13646 458 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 POLR2BP30876 1174 aaKnown RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 RPL9P32969 192 aaKnown RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 COPB1P53618 953 aaKnown RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 AP3M2P53677 418 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 LILRA4P59901 499 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 MYL6P60660 151 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 SMAD3P84022 425 aaKnown RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 APBA1Q02410 837 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 HSP90AA2PQ14568 343 aaPredicted RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 PTPN21Q16825 1174 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 TPD52L1Q16890 204 aaPredicted RBP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 KCNT2Q6UVM3 1135 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 TAS1R1Q7RTX1 841 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 FAM114A1Q8IWE2 563 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 COLGALT1Q8NBJ5 622 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 BEST2Q8NFU1 509 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 NKX2-4Q9H2Z4 354 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 NDST4Q9H3R1 872 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 VRTNQ9H8Y1 702 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 ITGA11Q9UKX5 1188 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 AGAP1Q9UPQ3 857 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 COL6A3P12111 3177 aa11.52□□□□□ -0.57
NPIPB3-210ENST00000542817 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 LGALS16A8MUM7 142 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 BECN2A8MW95 431 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 C5orf67F2Z3F1 127 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 TEX33O43247 280 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 RRP9O43818 475 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 STAU1O95793 577 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 ASS1P00966 412 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 TMEM191BP0C7N4 346 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 DNAJB1P25685 340 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 DNAJB2P25686 324 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 BMPR1AP36894 532 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 MTIF2P46199 727 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 MXI1P50539 228 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 ERVK-21P61565 698 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 RNASELQ05823 741 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 NCOA4Q13772 614 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 CAMK1Q14012 370 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 NR1I3Q14994 352 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 TIGD5Q53EQ6 642 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 KRT39Q6A163 491 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 SPOPLQ6IQ16 392 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 DCLRE1AQ6PJP8 1040 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 FIBCD1Q8N539 461 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 CACTINQ8WUQ7 758 aaKnown RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 IGSF21Q96ID5 467 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 UROC1Q96N76 676 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 PI4K2AQ9BTU6 479 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 VPS16Q9H269 839 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 MMRN2Q9H8L6 949 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 SIX2Q9NPC8 291 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 PRG3Q9Y2Y8 225 aaPredicted RBP11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 NME7Q9Y5B8 376 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 MYO7AQ13402 2215 aa11.51□□□□□ -0.57
NPIPB3-210ENST00000542817 UNC80Q8N2C7 3258 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 GTPBP10A4D1E9 387 aaKnown RBP11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 I3L4J1 428 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 P4HA2O15460 535 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 TNNC2P02585 160 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 ALDH2P05091 517 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 LAG3P18627 525 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 SLC9A1P19634 815 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 PBX1P40424 430 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 BRCC3P46736 316 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 OR1G1P47890 313 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 KLK7P49862 253 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 RBP5P82980 135 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 FANCCQ00597 558 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 TCERG1LQ5VWI1 586 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 CREBRFQ8IUR6 639 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 LRRC52Q8N7C0 313 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 KLHL23Q8NBE8 558 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 HASPINQ8TF76 798 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 TATDN2Q93075 761 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 ANKRD36BP1Q96IX9 119 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 CRACR2AQ9BSW2 395 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 SDCBP2Q9H190 292 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 MAGEC2Q9UBF1 373 aaPredicted RBP11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 SIK3Q9Y2K2 1263 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 FAN1Q9Y2M0 1017 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 NUB1Q9Y5A7 615 aa11.5□□□□□ -0.57
NPIPB3-210ENST00000542817 M0QZQ0 153 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 EPHB6O15197 1021 aa11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 XPOTO43592 962 aaKnown RBP11.49□□□□□ -0.57
NPIPB3-210ENST00000542817 STX10O60499 249 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms