RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 AMFRQ9UKV5 643 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 NR2E1Q9Y466 385 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 ITGA4P13612 1032 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 ORC1Q13415 861 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 IFNLR1Q8IU57 520 aaPredicted RBP18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 C1orf127Q8N9H9 656 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 USP38Q8NB14 1042 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 ADAMTS10Q9H324 1103 aa18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 NXF1Q9UBU9 619 aaKnown RBP18.47■□□□□ 0.55
TMEM50B-210ENST00000542230 B4GALT4O60513 344 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 MYL3P08590 195 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 GNA15P30679 374 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 POU5F1BQ06416 359 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 TRADDQ15628 312 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 WDR93Q6P2C0 686 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 UBR7Q8N806 425 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 KRT12Q99456 494 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 OSMRQ99650 979 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 TREHO43280 583 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 ZEB2O60315 1214 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 HOXA11P31270 313 aaPredicted RBP18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 CDH8P55286 799 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 TRPC3Q13507 836 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 DAB2IPQ5VWQ8 1189 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 ADAT2Q7Z6V5 191 aaKnown RBP18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 ZFYVE28Q9HCC9 887 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 CISHQ9NSE2 258 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 FAM53CQ9NYF3 392 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 HES2Q9Y543 173 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 ZNF236Q9UL36 1845 aa18.46■□□□□ 0.55
TMEM50B-210ENST00000542230 GPR32O75388 356 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 GJB6O95452 261 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 CYP1A2P05177 515 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 COMTP21964 271 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 RRM1P23921 792 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 ASPAP45381 313 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 PLA2G4AP47712 749 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 MFSD10Q14728 455 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 RHOT2Q8IXI1 618 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 KLHL7Q8IXQ5 586 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 SYCE1Q8N0S2 351 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 ZNF564Q8TBZ8 553 aaPredicted RBP18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 TMEM40Q8WWA1 233 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 DNAJB3Q8WWF6 145 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 CNOT8Q9UFF9 292 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 GABRQQ9UN88 632 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 NOC2LQ9Y3T9 749 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 TLL2Q9Y6L7 1015 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 ESYT3A0FGR9 886 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 THAP12O43422 761 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 IGHA2P01877 340 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 GLI1P08151 1106 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 BRD2P25440 801 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 RGS2P41220 211 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 TUBB4BP68371 445 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 ITIH3Q06033 890 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 TRIM32Q13049 653 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 ZNF699Q32M78 642 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 PAXIP1Q6ZW49 1069 aaPredicted RBP18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 MCOLN2Q8IZK6 566 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 CXorf38Q8TB03 319 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 EIF2AQ9BY44 585 aaKnown RBP18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 IMPG2Q9BZV3 1241 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 L1RE1Q9UN81 338 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 CNTN6Q9UQ52 1028 aa18.45■□□□□ 0.54
TMEM50B-210ENST00000542230 TRIP11Q15643 1979 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 A0A1B0GUA9 196 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 ERLIN2O94905 339 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 CYP1A1P04798 512 aaPredicted RBP18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 ITGB3P05106 788 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 MCF2P10911 925 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 CYP2C9P11712 490 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 ZNF132P52740 706 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 LLGL1Q15334 1064 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 SGSM1Q2NKQ1 1148 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 CYP4F22Q6NT55 531 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 TFAP2BQ92481 460 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 NIF3L1Q9GZT8 377 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 GTF3C4Q9UKN8 822 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 HNRNPLLQ8WVV9 542 aaKnown RBP18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 ZNF606Q8WXB4 792 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 ANKRD36BP1Q96IX9 119 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 APBA2Q99767 749 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 C11orf70Q9BRQ4 267 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 SDCBP2Q9H190 292 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 OGFRQ9NZT2 677 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 TMEM59LQ9UK28 342 aa18.44■□□□□ 0.54
TMEM50B-210ENST00000542230 TNNC2P02585 160 aa18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 PSEN2P49810 448 aa18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 AP3M2P53677 418 aa18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 HADHBP55084 474 aaKnown RBP18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 WDR72Q3MJ13 1102 aa18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 PBKQ96KB5 322 aa18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 ZCCHC17Q9NP64 241 aaKnown RBP18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 HMGXB4Q9UGU5 601 aa18.43■□□□□ 0.54
TMEM50B-210ENST00000542230 TARSL2A2RTX5 802 aaKnown RBP18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 NOMO3P69849 1222 aa18.42■□□□□ 0.54
TMEM50B-210ENST00000542230 ADAM17P78536 824 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms