RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 KCNK3O14649 394 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 DOK2O60496 412 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 URI1O94763 535 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TMEM63AO94886 807 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 RTN3O95197 1032 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 STARD3NLO95772 234 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 LPLP06858 475 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CELA3BP08861 270 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 GNAT1P11488 350 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 PRKCAP17252 672 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 MUTP22033 750 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CTSSP25774 331 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CDR1P51861 262 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 HK3P52790 923 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 NKX6-1P78426 367 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 DSC2Q02487 901 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 MALLQ13021 153 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CDC16Q13042 620 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CUL4AQ13619 759 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TIGD6Q17RP2 521 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TTC31Q49AM3 519 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 HABP4Q5JVS0 413 aaKnown RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 GJC2Q5T442 439 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 SLC30A6Q6NXT4 461 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TMC6Q7Z403 805 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TTC7BQ86TV6 843 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 C2CD5Q86YS7 1000 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 PHYKPLQ8IUZ5 450 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 APPL2Q8NEU8 664 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CYP2W1Q8TAV3 490 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 FEZF2Q8TBJ5 459 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 STT3BQ8TCJ2 826 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 HIC2Q96JB3 615 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 FAM167AQ96KS9 214 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 SLF1Q9BQI6 1058 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 PDCD2LQ9BRP1 358 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TXLNGYQ9BZA5 131 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 KCTD10Q9H3F6 313 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 SEMA4AQ9H3S1 761 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 ZWILCHQ9H900 591 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 KCNH7Q9NS40 1196 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 CLDND1Q9NY35 253 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 KLHL14Q9P2G3 628 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 VPS28Q9UK41 221 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TMCC3Q9ULS5 477 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 ADAMTS20P59510 1910 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 PRSS38A1L453 326 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 NUDT19A8MXV4 375 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 C19orf81C9J6K1 198 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 H7BY64 318 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 HMMRO75330 724 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 FAM155BO75949 473 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 SGPL1O95470 568 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 MTHFD1P11586 935 aaKnown RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 GYS1P13807 737 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 CHMP24386 653 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 CASP6P55212 293 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 LGALS4P56470 323 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 RNASE9P60153 205 aaKnown RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 RPL11P62913 178 aaKnown RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 SPIDRQ14159 915 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 ERV3-1Q14264 604 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 CPZQ66K79 652 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 MIGA2Q7L4E1 593 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 PRRT2Q7Z6L0 340 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 FAM129CQ86XR2 697 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 GALNT13Q8IUC8 556 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 HERC6Q8IVU3 1022 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 NLGN4XQ8N0W4 816 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 ARL6IP6Q8N6S5 226 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 MSANTD4Q8NCY6 345 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 NUP43Q8NFH3 380 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 RSAD2Q8WXG1 361 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 RUBCNQ92622 972 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 FATE1Q969F0 183 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 SH3KBP1Q96B97 665 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 TBC1D31Q96DN5 1066 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 CCDC34Q96HJ3 373 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 SPATA17Q96L03 361 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 PWWP2AQ96N64 755 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 SLC12A9Q9BXP2 914 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 AGXT2Q9BYV1 514 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 XPO4Q9C0E2 1151 aaKnown RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 ARHGAP39Q9C0H5 1083 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 EPB41L4AQ9HCS5 686 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 SAYSD1Q9NPB0 183 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 ABCF3Q9NUQ8 709 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 HAUS2Q9NVX0 235 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 CEP72Q9P209 647 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 TBC1D29Q9UFV1 150 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 STAP2Q9UGK3 403 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 MINPP1Q9UNW1 487 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 RRP7AQ9Y3A4 280 aaKnown RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 NUMBLQ9Y6R0 609 aa6.07□□□□□ -1.44
PRKDC-209ENST00000540819 RSF1Q96T23 1441 aaPredicted RBP6.07□□□□□ -1.44
PRKDC-209ENST00000540819 GPRASP1Q5JY77 1395 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 TDRD9Q8NDG6 1382 aaKnown RBP6.06□□□□□ -1.44
PRKDC-209ENST00000540819 A0A0B4J269 797 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 CLGNO14967 610 aa6.06□□□□□ -1.44
PRKDC-209ENST00000540819 ITGA5P08648 1049 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms